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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3275 and Psyr_3276 are separated by 11 nucleotides
Psyr_3276 and Psyr_3277 overlap by 4 nucleotides
Psyr_3277 and Psyr_3278 overlap by 4 nucleotides
Psyr_3278 and Psyr_3279 are separated by 204 nucleotides
Psyr_3275: Psyr_3275 - Helix-turn-helix protein RpiR:Sugar isomerase (SIS), at 3,922,978 to 3,923,841
_3275
Psyr_3276: Psyr_3276 - membrane protein, putative, at 3,923,853 to 3,924,851
_3276
Psyr_3277: Psyr_3277 - Phospholipase D/Transphosphatidylase, at 3,924,848 to 3,926,098
_3277
Psyr_3278: Psyr_3278 - Endonuclease/exonuclease/phosphatase, at 3,926,095 to 3,926,880
_3278
Psyr_3279: Psyr_3279 - Cytochrome B561, bacterial, at 3,927,085 to 3,927,624
_3279
Group
Condition
Psyr
_3275
Psyr
_3276
Psyr
_3277
Psyr
_3278
Psyr
_3279
carbon source
4-hydroxybutyric (C)
-1.9
-0.1
+0.0
+0.0
+0.0
carbon source
a-Ketoglutaric (C)
-1.2
-0.2
+0.1
-0.4
-0.1
stress
KB with Nalidixic 12.5 ug/ml
-0.5
-0.4
-0.6
-0.4
+0.1
stress
KB with Avocadyne 10 mM
-0.3
-0.1
-0.6
-0.3
-0.1
carbon source
Citric Acid (C)
-1.2
+0.1
+0.1
-0.1
-0.0
stress
KB with Terpene 10 mM
-0.3
-0.1
-0.2
-0.5
+0.0
carbon source
L-Proline (C)
-0.7
-0.3
-0.1
+0.2
-0.2
stress
KB with Harmol 10 mM
-0.1
-0.1
-0.1
-0.7
-0.0
stress
KB with Totarol 10 mM
-0.1
+0.0
-0.3
-0.5
-0.1
in planta
epiphytic; Lima bean
-0.3
-0.1
+0.1
-0.5
-0.1
stress
KB with Novobiocin 250 ug/ml
-0.5
-0.2
-0.1
+0.1
-0.0
stress
KB with Isovanillin 10 mM
-0.6
+0.0
-0.4
+0.0
+0.2
stress
KB with Berberine 250 ug/ml
-0.7
-0.1
-0.1
+0.1
+0.1
stress
KB with Lupeol 10 mM
-0.1
+0.1
-0.2
-0.6
+0.1
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.5
+0.2
-0.3
-0.1
+0.1
stress
KB with Avocatin A 10 mM
-0.1
+0.1
-0.2
-0.4
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
-0.4
-0.1
-0.1
+0.3
-0.1
stress
KB with Gambogic Acid 10 mM
-0.2
+0.2
-0.3
+0.2
-0.2
in planta
epiphytic; Green bean
-0.4
+0.2
+0.2
-0.2
+0.2
stress
KB with Veratric Acid 10 mM
-0.3
+0.3
+0.0
+0.3
-0.2
in planta
apoplastic, sonication recovery; Green bean
-0.4
-0.1
+0.3
+0.2
+0.2
stress
KB with Ferulic Acid 180 ug/ml
-0.4
+0.2
+0.1
+0.2
+0.2
in planta
apoplastic; Pepper
-0.2
-0.3
+0.4
-0.1
+0.6
aphid
library passed through aphids in food, 72 hours
-0.3
+0.2
+0.2
+0.6
-0.2
stress
KB with Acridine orange 62.5 ug/ml
-0.3
+0.1
+0.2
+0.6
-0.1
in planta
apoplastic; Pepper
-0.0
+0.4
+0.0
+0.6
-0.3
carbon source
Citric Acid (C)
+1.1
-0.2
-0.1
-0.1
+0.0
in planta
apoplastic; Lima bean
+0.1
-0.3
+0.5
+0.2
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.1
+0.0
+0.1
+0.8
in planta
apoplastic; Green bean; 13 days
+0.8
-0.2
+0.3
+0.6
-0.1
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