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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3222 and Psyr_3223 are separated by 3 nucleotides
Psyr_3223 and Psyr_3224 overlap by 11 nucleotides
Psyr_3224 and Psyr_3225 are separated by 0 nucleotides
Psyr_3225 and Psyr_3226 are separated by 52 nucleotides
Psyr_3222: Psyr_3222 - Polysaccharide biosynthesis protein, at 3,859,580 to 3,861,094
_3222
Psyr_3223: Psyr_3223 - Glycosyl transferase, family 2, at 3,861,098 to 3,862,033
_3223
Psyr_3224: Psyr_3224 - Low molecular weight phosphotyrosine protein phosphatase, at 3,862,023 to 3,862,475
_3224
Psyr_3225: Psyr_3225 - Protein-tyrosine kinase, at 3,862,476 to 3,864,683
_3225
Psyr_3226: Psyr_3226 - Transcriptional activator RfaH, at 3,864,736 to 3,865,248
_3226
Group
Condition
Psyr
_3222
Psyr
_3223
Psyr
_3224
Psyr
_3225
Psyr
_3226
stress
KB with Berberine 250 ug/ml
-0.1
-0.3
-0.7
-0.3
-0.8
in planta
apoplastic, sonication recovery; Green bean
-0.4
-0.0
-0.5
-0.3
+0.2
aphid
library passed through aphids in food, 24 hours
+0.2
-0.1
-0.3
-0.1
-0.8
in planta
apoplastic; Pepper
+0.4
-0.2
-0.4
+0.2
-0.7
in planta
apoplastic; Pepper
+0.1
-0.6
-0.6
+0.2
+0.2
in planta
apoplastic; Pepper
+0.2
-0.3
-0.1
+0.2
-0.7
stress
KB with Isovanillin 10 mM
-0.2
-0.1
-0.7
+0.2
+0.3
in planta
epiphytic; Lima bean
-0.4
+0.2
-0.5
-0.2
+0.6
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.2
+0.3
-0.3
+0.2
-0.6
stress
KB with Nalidixic 12.5 ug/ml
+0.5
+0.3
-0.4
+0.1
-0.7
stress
KB with Quercetin 360 ug/ml
+0.2
-0.3
-0.5
+0.1
+0.4
in planta
apoplastic; Pepper
-0.1
-0.4
-0.3
+0.2
+0.5
aphid
library passed through aphids in food, 72 hours
-0.3
+0.1
-0.2
-0.5
+0.8
in planta
apoplastic, grinding recovery; Green bean
+0.2
+0.5
-0.3
-0.3
-0.1
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+0.3
+0.1
+0.3
-0.7
stress
KB with dihydrojasmonic, methyl ester 10 mM
+0.1
+0.2
-0.5
+0.2
+0.4
in planta
epiphytic; Lima bean
-0.3
+0.3
-0.1
-0.2
+0.8
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.1
+0.7
+0.4
-0.4
in planta
apoplastic; Green bean; 6 days
-0.0
+0.4
-0.4
-0.3
+0.7
stress
KB with Rifampicin 0.1 mg/ml
+0.3
+0.1
-0.4
+0.3
+0.3
stress
KB with Quinine Hdrochloride 10 mM
+0.3
+0.2
+0.4
+0.1
-0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
+0.3
-0.3
+0.4
+0.5
in planta
Green bean; epiphytic
+0.3
+0.5
-0.2
+0.2
+0.1
in planta
apoplastic; Green bean; 6 days
+0.2
+0.4
-0.3
-0.0
+0.6
stress
KB with capsaicin 0.125 mg/ml
+0.2
+0.2
-0.2
+0.3
+0.5
stress
KB with Diallyl sulfide 10 mM
+0.2
+0.2
-0.3
+0.3
+0.5
stress
KB with Flavone 0.125 mg/ml
+0.1
+0.3
-0.2
+0.3
+0.6
in planta
apoplastic, grinding recovery; Green bean
-0.4
+0.1
+0.7
+0.5
+0.3
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
+0.2
+0.2
+0.7
+0.2
-0.0
in planta
apoplastic; Lima bean
+0.2
+0.1
+0.8
+0.3
+0.2
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