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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3112 and Psyr_3113 are separated by 33 nucleotides
Psyr_3113 and Psyr_3114 are separated by 125 nucleotides
Psyr_3114 and Psyr_3115 are separated by 172 nucleotides
Psyr_3115 and Psyr_3116 are separated by 111 nucleotides
Psyr_3112: Psyr_3112 - Putative ammonia monooxygenase, at 3,729,253 to 3,730,341
_3112
Psyr_3113: Psyr_3113 - N-acylglucosamine 2-epimerase, at 3,730,375 to 3,731,619
_3113
Psyr_3114: Psyr_3114 - methyl-accepting chemotaxis sensory transducer, at 3,731,745 to 3,733,370
_3114
Psyr_3115: Psyr_3115 - Glycerate kinase, at 3,733,543 to 3,734,682
_3115
Psyr_3116: Psyr_3116 - transcriptional regulator, CdaR family, at 3,734,794 to 3,735,885
_3116
Group
Condition
Psyr
_3112
Psyr
_3113
Psyr
_3114
Psyr
_3115
Psyr
_3116
carbon source
D-Mannose (C)
-0.1
-2.0
-0.2
-1.1
-0.4
in planta
apoplastic; Pepper
-0.2
-0.2
-1.0
-1.0
-1.1
in planta
apoplastic; Pepper
-0.3
-0.2
-0.5
-1.0
-0.6
stress
KB with capsaicin 0.125 mg/ml
+0.0
+0.1
-0.2
-0.7
-1.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.2
-0.4
-1.3
-0.0
-0.3
carbon source
Citric Acid (C)
+0.0
-0.1
-0.1
-1.3
-0.3
in planta
epiphytic; Lima bean
-0.2
+0.1
-0.5
-1.4
+0.3
stress
KB with Flavone 0.25 mg/ml
+0.0
-0.0
-0.3
-0.4
-0.9
in planta
apoplastic, grinding recovery; Green bean
-0.0
-0.8
-1.3
+0.6
+0.0
stress
KB with Erythromycin 25 ug/ml
-0.2
+0.0
-0.4
-0.1
-0.8
stress
KB with Plumbagin 10 mM
-1.4
-0.2
+0.3
-0.1
-0.0
stress
KB with Harmol 10 mM
-0.1
-0.2
-0.4
-0.7
+0.2
stress
KB with Acacetin 10 mM
-0.1
+0.2
-0.4
-0.2
-0.7
stress
KB with Gossypetin 10 mM
+0.0
-0.2
-0.1
-0.9
+0.3
stress
KB with Fusaric 250 ug/ml
+0.0
+0.1
-0.3
+0.5
-1.2
in planta
apoplastic, sonication recovery; Green bean
-0.3
-0.6
-0.4
+0.7
-0.3
in planta
epiphytic; Green bean
-0.1
-0.5
+0.5
-0.3
-0.4
stress
KB with Ginkgolide A 10 mM
-0.2
-0.2
-0.5
-0.7
+1.0
aphid
library passed through aphids in food, 72 hours
+0.2
+0.5
-0.8
-0.0
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.0
-0.5
-0.4
+0.7
-0.3
in planta
epiphytic; Lima bean
-0.1
+0.4
+0.2
-0.5
-0.4
stress
KB with L-alliin 10 mM
-0.1
-0.1
-0.3
-0.4
+0.6
in planta
apoplastic; Pepper
+0.2
-0.4
-0.6
+0.1
+0.3
in planta
apoplastic; Green bean; 13 days
-0.1
-0.2
-0.8
+0.5
+0.6
in planta
apoplastic; Lima bean
-0.3
-0.3
+0.6
-0.5
+0.5
carbon source
4-hydroxybutyric (C)
-0.1
+0.0
+0.3
+0.7
-0.5
stress
KB with Conessine 10 mM
-0.3
-0.0
-0.4
+0.2
+0.9
in planta
apoplastic; Lima bean
+0.1
-0.4
+0.1
+0.3
+0.6
aphid
library passed through aphids in food, 72 hours
+0.1
+0.2
+0.2
+0.7
+0.8
in planta
apoplastic; Green bean; 6 days
-0.0
+0.1
+0.5
+0.4
+1.1
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