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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3070 and Psyr_3071 overlap by 17 nucleotides
Psyr_3071 and Psyr_3072 overlap by 4 nucleotides
Psyr_3072 and Psyr_3073 are separated by 278 nucleotides
Psyr_3073 and Psyr_3074 are separated by 322 nucleotides
Psyr_3070: Psyr_3070 - Dimethylmenaquinone methyltransferase, at 3,669,576 to 3,670,295
_3070
Psyr_3071: Psyr_3071 - 3-isopropylmalate dehydrogenase, at 3,670,279 to 3,671,469
_3071
Psyr_3072: Psyr_3072 - HMG-CoA lyase-like protein, at 3,671,466 to 3,672,494
_3072
Psyr_3073: Psyr_3073 - transcriptional regulator, LysR family, at 3,672,773 to 3,673,684
_3073
Psyr_3074: Psyr_3074 - Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein, at 3,674,007 to 3,676,574
_3074
Group
Condition
Psyr
_3070
Psyr
_3071
Psyr
_3072
Psyr
_3073
Psyr
_3074
stress
KB with Rifampicin 0.1 mg/ml
-0.3
-0.2
+0.0
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.1
+0.3
-1.3
-0.0
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
+0.1
-0.1
-0.5
-0.4
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.2
+0.1
-0.0
-0.4
-0.2
stress
KB with Quinine Hdrochloride 10 mM
-0.3
-0.1
+0.1
-0.3
-0.2
stress
KB with Novobiocin 250 ug/ml
-0.0
+0.2
+0.1
-0.7
-0.3
stress
KB with Methanol 5 vol%
-0.1
+0.3
-0.0
-0.5
-0.2
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.2
-0.1
-0.1
-0.4
-0.1
stress
MBOA 2.5 mM
-0.1
+0.2
-0.2
-0.3
+0.1
stress
KB with Isovanillin 10 mM
+0.2
-0.0
-0.0
-0.4
-0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.3
-0.0
-0.1
-0.3
-0.2
in planta
apoplastic; Green bean; 13 days
-0.2
-0.4
-0.2
+0.2
+0.3
stress
KB with Carbenicillin 250 ug/ml
-0.1
+0.3
-0.1
-0.2
-0.2
stress
KB with 2',2'-Bisepigallocatechin Digallate 10 mM
-0.4
+0.3
+0.2
-0.1
-0.2
in planta
apoplastic; Lima bean
+0.2
-0.4
-0.1
+0.2
-0.1
in planta
apoplastic; Lima bean
+0.4
-0.5
-0.1
+0.1
-0.1
in planta
epiphytic; Green bean
+0.1
-0.0
+0.3
-0.3
-0.2
in planta
apoplastic, sonication recovery; Green bean
-0.4
-0.3
-0.0
+0.7
-0.0
carbon source
Sucrose (C)
-0.1
+0.4
+0.1
-0.4
-0.0
stress
KB with Biochanin a diacetate 10 mM
-0.3
-0.1
+0.2
+0.3
-0.0
stress
KB with Ampicillin 15.6 ug/ml
-0.1
+0.3
-0.1
+0.2
-0.2
carbon source
Glycerol (C)
-0.3
+0.2
+0.1
+0.2
-0.1
stress
KB with Nalidixic 12.5 ug/ml
+0.1
+0.2
+0.1
+0.2
-0.4
in planta
epiphytic; Green bean
+0.2
-0.4
+0.3
+0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.1
+0.2
+0.5
-0.1
in planta
apoplastic, grinding recovery; Green bean
-0.2
+0.1
+0.2
+0.1
+0.3
in planta
apoplastic, sonication recovery; Green bean
-0.3
+0.0
+0.3
+1.0
-0.1
carbon source
D-Mannose (C)
+0.1
+0.5
+0.2
+0.2
+0.1
stress
KB with Berberine 250 ug/ml
+0.0
+0.4
+0.2
+0.4
+0.0
carbon source
4-hydroxybutyric (C)
-0.0
+0.3
+0.2
+0.4
+0.1
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