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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3013 and Psyr_3014 are separated by 77 nucleotides
Psyr_3014 and Psyr_3015 overlap by 1 nucleotides
Psyr_3015 and Psyr_3016 are separated by 3 nucleotides
Psyr_3016 and Psyr_3017 are separated by 715 nucleotides
Psyr_3013: Psyr_3013 - magnesium chelatase subunit ChlD, at 3,606,839 to 3,607,426
_3013
Psyr_3014: Psyr_3014 - protoporphyrin IX magnesium-chelatase, at 3,607,504 to 3,608,538
_3014
Psyr_3015: Psyr_3015 - cobaltochelatase CobN subunit, at 3,608,538 to 3,612,302
_3015
Psyr_3016: Psyr_3016 - Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K, at 3,612,306 to 3,613,370
_3016
Psyr_3017: Psyr_3017 - conserved hypothetical protein, at 3,614,086 to 3,614,268
_3017
Group
Condition
Psyr
_3013
Psyr
_3014
Psyr
_3015
Psyr
_3016
Psyr
_3017
aphid
library passed through aphids in food, 72 hours
-5.5
-2.4
-2.0
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-6.0
-0.8
-0.9
N.D.
N.D.
carbon source
4-hydroxybutyric (C)
-4.3
-1.6
-1.8
N.D.
N.D.
in planta
apoplastic; Lima bean
-2.3
-1.3
-0.8
N.D.
N.D.
stress
MBOA 2.5 mM
-3.5
-0.4
-0.4
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-2.2
-0.8
-1.3
N.D.
N.D.
stress
DMSO
-2.6
-1.0
-0.4
N.D.
N.D.
stress
KB with Conessine 10 mM
-3.3
-0.0
-0.6
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
-2.0
-1.2
-0.5
N.D.
N.D.
stress
DMSO
-3.7
+0.2
-0.1
N.D.
N.D.
stress
KB with Oxymatrine 10 mM
-2.9
-0.4
-0.2
N.D.
N.D.
carbon source
L-Malic (C)
-1.7
-1.5
-0.2
N.D.
N.D.
stress
KB with Ginkgolide A 10 mM
-2.1
-0.8
-0.4
N.D.
N.D.
in planta
apoplastic, grinding recovery; Green bean
-0.6
-2.0
-0.7
N.D.
N.D.
carbon source
Fumaric (C)
-2.3
-0.3
-0.7
N.D.
N.D.
in planta
epiphytic; Lima bean
-0.6
-1.5
-1.1
N.D.
N.D.
in planta
epiphytic; Lima bean
-1.7
-0.9
-0.6
N.D.
N.D.
in planta
apoplastic; Lima bean
-1.7
-0.7
-0.7
N.D.
N.D.
in planta
apoplastic; Pepper
-2.1
-0.4
-0.5
N.D.
N.D.
no stress control
no stress control
-0.5
-1.7
-0.7
N.D.
N.D.
nophagecontrol
TIme6-nophage
-1.2
-0.8
-0.9
N.D.
N.D.
stress
KB with Physcion 10 mM
-1.4
-0.8
-0.7
N.D.
N.D.
carbon source
Citric Acid (C)
-2.2
-0.5
-0.1
N.D.
N.D.
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
-1.6
-0.7
-0.4
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
-1.1
-1.1
-0.5
N.D.
N.D.
in planta
apoplastic; Green bean; 13 days
-0.6
-1.8
-0.2
N.D.
N.D.
carbon source
Citric Acid (C)
-2.5
+0.2
-0.2
N.D.
N.D.
stress
KB with Fusaric 250 ug/ml
-2.5
+0.3
+0.1
N.D.
N.D.
carbon source
Sucrose (C)
-1.4
+1.4
+0.0
N.D.
N.D.
in planta
apoplastic; Pepper
+1.7
-1.0
-0.1
N.D.
N.D.
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