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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3009 and Psyr_3010 overlap by 4 nucleotides
Psyr_3010 and Psyr_3011 overlap by 24 nucleotides
Psyr_3011 and Psyr_3012 are separated by 317 nucleotides
Psyr_3012 and Psyr_3013 are separated by 157 nucleotides
Psyr_3009: Psyr_3009 - Nicotinamide mononucleotide transporter PnuC, at 3,603,690 to 3,604,253
_3009
Psyr_3010: Psyr_3010 - nicotinamide-nucleotide adenylyltransferase, putative, at 3,604,250 to 3,604,795
_3010
Psyr_3011: Psyr_3011 - Helix-turn-helix, Fis-type, at 3,604,772 to 3,606,097
_3011
Psyr_3012: Psyr_3012 - conserved hypothetical protein, at 3,606,415 to 3,606,681
_3012
Psyr_3013: Psyr_3013 - magnesium chelatase subunit ChlD, at 3,606,839 to 3,607,426
_3013
Group
Condition
Psyr
_3009
Psyr
_3010
Psyr
_3011
Psyr
_3012
Psyr
_3013
aphid
library passed through aphids in food, 72 hours
-0.1
-0.1
-0.1
N.D.
-6.0
aphid
library passed through aphids in food, 72 hours
-0.2
+0.4
-0.2
N.D.
-5.5
stress
DMSO
-0.0
-0.1
+0.1
N.D.
-3.7
stress
MBOA 2.5 mM
-0.1
-0.0
-0.1
N.D.
-3.5
carbon source
4-hydroxybutyric (C)
-0.0
+0.6
+0.2
N.D.
-4.3
stress
KB with Oxymatrine 10 mM
-0.2
-0.2
-0.1
N.D.
-2.9
stress
KB with Conessine 10 mM
+0.0
-0.0
-0.0
N.D.
-3.3
aphid
library passed through aphids in food, 72 hours
-0.2
-0.1
-0.4
N.D.
-2.2
in planta
apoplastic; Lima bean
-0.3
+0.1
-0.2
N.D.
-2.3
carbon source
Citric Acid (C)
-0.1
-0.4
-0.0
N.D.
-2.2
stress
DMSO
+0.0
+0.1
-0.2
N.D.
-2.6
stress
MBOA 1.2 mM
-0.3
-0.1
-0.1
N.D.
-2.1
stress
KB with Fusaric 250 ug/ml
-0.2
+0.3
-0.2
N.D.
-2.5
carbon source
L-Malic (C)
+0.0
-0.6
-0.1
N.D.
-1.7
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
-0.2
-0.3
-0.2
N.D.
-1.6
carbon source
Citric Acid (C)
-0.0
+0.3
+0.0
N.D.
-2.5
stress
KB with Flavone 0.125 mg/ml
-0.1
+0.0
+0.0
N.D.
-2.1
stress
KB with Ginkgolide A 10 mM
+0.0
+0.1
-0.0
N.D.
-2.1
stress
KB with Plumbagin 10 mM
-0.1
-0.1
+0.2
N.D.
-2.0
stress
KB with Sinomenine 10 mM
-0.3
+0.1
+0.3
N.D.
-1.9
in planta
Green bean; epiphytic
+0.2
+0.0
-0.2
N.D.
-1.8
in planta
apoplastic; Pepper
+0.3
+0.1
-0.1
N.D.
-2.1
carbon source
4-Aminobutyric (C)
-0.1
+0.4
-0.0
N.D.
-1.8
in planta
apoplastic; Pepper
+0.2
-0.2
+0.2
N.D.
-1.7
carbon source
Fumaric (C)
-0.1
+0.5
+0.5
N.D.
-2.3
carbon source
Glycerol (C)
+0.1
+0.3
+0.3
N.D.
-1.8
carbon source
Succinic Acid (C)
-0.1
+0.3
+0.5
N.D.
-1.7
carbon source
D-Gluconic (C)
-0.3
+0.4
+0.3
N.D.
-1.3
in planta
apoplastic; Pepper
+0.2
+0.6
+0.3
N.D.
+1.4
in planta
apoplastic; Pepper
+0.4
+0.4
+0.3
N.D.
+1.7
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