Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_3004 and Psyr_3005 are separated by 80 nucleotidesPsyr_3005 and Psyr_3006 are separated by 126 nucleotidesPsyr_3006 and Psyr_3007 overlap by 6 nucleotidesPsyr_3007 and Psyr_3008 overlap by 4 nucleotides Psyr_3004: Psyr_3004 - transcriptional regulator, LysR family, at 3,599,856 to 3,600,815 _3004 Psyr_3005: Psyr_3005 - 3-oxoadipate enol-lactonase, at 3,600,896 to 3,601,687 _3005 Psyr_3006: Psyr_3006 - Protein of unknown function DUF419, at 3,601,814 to 3,602,182 _3006 Psyr_3007: Psyr_3007 - Protein of unknown function DUF1294, at 3,602,177 to 3,602,611 _3007 Psyr_3008: Psyr_3008 - Undecaprenyl-diphosphatase, at 3,602,608 to 3,603,438 _3008
Group Condition Psyr_3004 Psyr_3005 Psyr_3006 Psyr_3007 Psyr_3008
in planta apoplastic, grinding recovery; Green bean +0.2 -1.5 +0.4 -2.2 -3.1
stress KB with Rotenone 0.25 mg/ml -0.7 -0.4 +0.1 -0.2 -4.2
stress KB with Berberine 250 ug/ml -0.2 -0.9 -0.2 -0.6 -3.0
in planta epiphytic; Lima bean +0.6 -2.7 -0.3 +0.0 -2.1
stress KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM +0.2 -0.5 +0.3 -0.3 -4.2
stress KB with Avocadene 10 mM -0.1 -0.7 +0.4 +0.1 -4.1
stress KB with Mexicanolide 10 mM -0.2 -0.4 +0.4 -0.5 -3.5
stress KB with Flavone 0.125 mg/ml +0.0 +0.4 -0.0 -0.1 -4.4
stress KB with Dimethyl Sulfoxide 1.25 vol% -0.5 +0.2 +0.1 +0.3 -4.2
stress KB with Quinine Hdrochloride 10 mM +0.4 -0.1 +0.6 -1.1 -3.7
stress KB with Brucine 10 mM +0.6 -0.7 +0.3 -0.6 -3.4
stress KB with Isovanillin 10 mM -0.8 +0.7 -0.2 -0.5 -3.1
kb KB -0.1 +0.3 +0.0 +0.7 -4.7
stress KB with Usnic Acid 10 mM +0.4 -0.6 +0.1 +0.2 -3.7
stress KB with Flavone 0.25 mg/ml -0.5 +1.3 -0.1 -0.1 -4.0
in planta apoplastic; Green bean; 6 days -0.2 +0.7 +0.2 -0.7 -3.2
in planta apoplastic; Lima bean +0.4 +0.6 -0.2 +0.2 -4.3
stress KB with Rotenone 0.125 mg/ml -0.5 +0.6 +0.1 +0.3 -3.8
in planta apoplastic; Pepper -0.5 -0.7 +0.2 +1.0 -3.2
in planta apoplastic; Pepper -0.9 +1.1 +0.0 +0.1 -3.3
in planta apoplastic; Pepper -0.5 +0.9 +0.0 +0.3 -3.7
in planta apoplastic, grinding recovery; Green bean -0.3 +0.3 +1.0 +0.2 -3.6
stress KB with Rifampicin 0.1 mg/ml +0.0 +1.0 +0.0 +0.3 -3.8
in planta apoplastic; Green bean; 6 days -0.4 +1.0 +0.7 -0.0 -3.5
in planta apoplastic, sonication recovery; Green bean -1.3 +1.2 +0.7 +0.7 -3.4
in planta apoplastic, sonication recovery; Green bean -0.9 +1.2 +0.5 +0.6 -3.5
in planta apoplastic; Pepper +0.1 +1.4 +0.3 -1.2 -2.3
stress KB with Cantharidin 10 mM +0.2 +0.1 +0.2 +1.1 -3.3
stress KB with Nitrofurantoin 0.25 mg/ml -0.3 +1.0 +0.4 +0.5 -2.9
in planta apoplastic; Pepper -0.1 +1.9 -0.1 -0.8 -2.0
remove
Psyr_3004
plot
remove
Psyr_3005
plot
remove
Psyr_3006
remove
Psyr_3007
plot
remove
Psyr_3008
plot