Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_3004 and Psyr_3005 are separated by 80 nucleotides
Psyr_3005 and Psyr_3006 are separated by 126 nucleotides
Psyr_3006 and Psyr_3007 overlap by 6 nucleotides
Psyr_3007 and Psyr_3008 overlap by 4 nucleotides
Psyr_3004: Psyr_3004 - transcriptional regulator, LysR family, at 3,599,856 to 3,600,815
_3004
Psyr_3005: Psyr_3005 - 3-oxoadipate enol-lactonase, at 3,600,896 to 3,601,687
_3005
Psyr_3006: Psyr_3006 - Protein of unknown function DUF419, at 3,601,814 to 3,602,182
_3006
Psyr_3007: Psyr_3007 - Protein of unknown function DUF1294, at 3,602,177 to 3,602,611
_3007
Psyr_3008: Psyr_3008 - Undecaprenyl-diphosphatase, at 3,602,608 to 3,603,438
_3008
Group
Condition
Psyr
_3004
Psyr
_3005
Psyr
_3006
Psyr
_3007
Psyr
_3008
in planta
apoplastic, grinding recovery; Green bean
+0.2
-1.5
+0.4
-2.2
-3.1
stress
KB with Rotenone 0.25 mg/ml
-0.7
-0.4
+0.1
-0.2
-4.2
stress
KB with Berberine 250 ug/ml
-0.2
-0.9
-0.2
-0.6
-3.0
in planta
epiphytic; Lima bean
+0.6
-2.7
-0.3
+0.0
-2.1
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.2
-0.5
+0.3
-0.3
-4.2
stress
KB with Avocadene 10 mM
-0.1
-0.7
+0.4
+0.1
-4.1
stress
KB with Mexicanolide 10 mM
-0.2
-0.4
+0.4
-0.5
-3.5
stress
KB with Flavone 0.125 mg/ml
+0.0
+0.4
-0.0
-0.1
-4.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.5
+0.2
+0.1
+0.3
-4.2
stress
KB with Quinine Hdrochloride 10 mM
+0.4
-0.1
+0.6
-1.1
-3.7
stress
KB with Brucine 10 mM
+0.6
-0.7
+0.3
-0.6
-3.4
stress
KB with Isovanillin 10 mM
-0.8
+0.7
-0.2
-0.5
-3.1
kb
KB
-0.1
+0.3
+0.0
+0.7
-4.7
stress
KB with Usnic Acid 10 mM
+0.4
-0.6
+0.1
+0.2
-3.7
stress
KB with Flavone 0.25 mg/ml
-0.5
+1.3
-0.1
-0.1
-4.0
in planta
apoplastic; Green bean; 6 days
-0.2
+0.7
+0.2
-0.7
-3.2
in planta
apoplastic; Lima bean
+0.4
+0.6
-0.2
+0.2
-4.3
stress
KB with Rotenone 0.125 mg/ml
-0.5
+0.6
+0.1
+0.3
-3.8
in planta
apoplastic; Pepper
-0.5
-0.7
+0.2
+1.0
-3.2
in planta
apoplastic; Pepper
-0.9
+1.1
+0.0
+0.1
-3.3
in planta
apoplastic; Pepper
-0.5
+0.9
+0.0
+0.3
-3.7
in planta
apoplastic, grinding recovery; Green bean
-0.3
+0.3
+1.0
+0.2
-3.6
stress
KB with Rifampicin 0.1 mg/ml
+0.0
+1.0
+0.0
+0.3
-3.8
in planta
apoplastic; Green bean; 6 days
-0.4
+1.0
+0.7
-0.0
-3.5
in planta
apoplastic, sonication recovery; Green bean
-1.3
+1.2
+0.7
+0.7
-3.4
in planta
apoplastic, sonication recovery; Green bean
-0.9
+1.2
+0.5
+0.6
-3.5
in planta
apoplastic; Pepper
+0.1
+1.4
+0.3
-1.2
-2.3
stress
KB with Cantharidin 10 mM
+0.2
+0.1
+0.2
+1.1
-3.3
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.3
+1.0
+0.4
+0.5
-2.9
in planta
apoplastic; Pepper
-0.1
+1.9
-0.1
-0.8
-2.0
remove
Psyr_3004
plot
remove
Psyr_3005
plot
remove
Psyr_3006
remove
Psyr_3007
plot
remove
Psyr_3008
plot