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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2997 and Psyr_2998 overlap by 4 nucleotides
Psyr_2998 and Psyr_2999 are separated by 13 nucleotides
Psyr_2999 and Psyr_3000 overlap by 4 nucleotides
Psyr_3000 and Psyr_3001 overlap by 32 nucleotides
Psyr_2997: Psyr_2997 - Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region, at 3,592,521 to 3,594,704
_2997
Psyr_2998: Psyr_2998 - conserved hypothetical protein, at 3,594,701 to 3,595,714
_2998
Psyr_2999: Psyr_2999 - LmbE-like protein, at 3,595,728 to 3,596,501
_2999
Psyr_3000: Psyr_3000 - methyltransferase, putative, at 3,596,498 to 3,597,124
_3000
Psyr_3001: Psyr_3001 - Glycosyl transferase, family 2, at 3,597,093 to 3,597,746
_3001
Group
Condition
Psyr
_2997
Psyr
_2998
Psyr
_2999
Psyr
_3000
Psyr
_3001
in planta
apoplastic; Green bean; 13 days
-0.9
-0.5
-0.5
-0.4
-0.4
aphid
library passed through aphids in food, 72 hours
+0.5
-0.8
-0.4
-0.9
-0.7
in planta
epiphytic; Green bean
-0.3
+0.2
-0.2
-0.8
-0.4
in planta
apoplastic; Lima bean
-0.6
+0.4
+0.3
-1.1
-0.2
in planta
apoplastic; Lima bean
-0.3
+0.3
-0.0
-1.3
+0.1
stress
KB with Chloramphenicol 12.5 ug/ml
-0.1
-0.1
-0.5
-0.8
+0.4
in planta
apoplastic; Lima bean
-0.6
+0.2
+0.5
-0.5
+0.1
stress
KB with Plumbagin 10 mM
+0.6
+0.4
-1.4
-0.0
+0.2
carbon source
D-Gluconic (C)
-0.2
-0.1
-0.8
+1.3
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.2
-0.1
-1.0
+1.1
+0.2
in planta
apoplastic, sonication recovery; Green bean
-0.5
-0.0
-0.6
+1.4
-0.1
stress
KB with Paclitaxel 10 mM
-0.1
+0.2
-0.8
+0.9
+0.2
in planta
Green bean; epiphytic
+0.0
-0.4
+1.3
-0.5
+0.0
carbon source
Citric Acid (C)
-0.4
+0.4
-0.5
+1.1
-0.1
kb
KB
+0.0
-0.4
-0.3
+1.0
+0.3
in planta
Green bean; epiphytic
+0.2
-0.6
+1.5
-0.5
+0.1
kb
KB
+0.0
+0.6
-0.3
+0.8
-0.4
carbon source
4-Aminobutyric (C)
-0.4
-0.1
-0.1
+1.2
+0.3
in planta
apoplastic, grinding recovery; Green bean
-0.2
+0.0
-0.3
+1.4
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
+0.5
-0.7
+0.5
+1.1
stress
KB with Nalidixic 12.5 ug/ml
-0.2
-0.1
-0.0
+1.6
+0.1
stress
KB with L-alliin 10 mM
-0.1
+0.4
-0.4
+1.2
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
+0.4
+0.2
+1.0
-0.3
stress
KB with Fusaric 250 ug/ml
-0.1
-0.1
+0.4
+1.0
+0.2
stress
KB with capsaicin 0.125 mg/ml
+0.0
+0.0
+0.2
+1.6
-0.2
stress
KB with Rifampicin 0.1 mg/ml
+0.0
+0.2
+0.3
+1.2
-0.1
in planta
epiphytic; Lima bean
-0.5
+0.1
+0.2
+1.9
+0.2
in planta
epiphytic; Lima bean
-0.3
+0.6
-0.0
+1.8
+0.2
in planta
apoplastic; Pepper
+0.1
-0.5
+1.6
+1.1
+0.8
in planta
apoplastic; Pepper
+0.1
-0.2
+1.8
+1.3
+0.5
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