Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_2965 and Psyr_2966 are separated by 67 nucleotidesPsyr_2966 and Psyr_2967 are separated by 316 nucleotidesPsyr_2967 and Psyr_2968 are separated by 12 nucleotidesPsyr_2968 and Psyr_2969 overlap by 1 nucleotides Psyr_2965: Psyr_2965 - amino acid ABC transporter ATP-binding protein, PAAT family, at 3,553,271 to 3,554,068 _2965 Psyr_2966: Psyr_2966 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 3,554,136 to 3,556,064 _2966 Psyr_2967: Psyr_2967 - Secretion protein HlyD, at 3,556,381 to 3,557,622 _2967 Psyr_2968: Psyr_2968 - Hydrophobe/amphiphile efflux-1 HAE1, at 3,557,635 to 3,560,826 _2968 Psyr_2969: Psyr_2969 - RND efflux system, outer membrane lipoprotein, NodT, at 3,560,826 to 3,562,223 _2969
Group Condition Psyr_2965 Psyr_2966 Psyr_2967 Psyr_2968 Psyr_2969
aphid library passed through aphids in food, 72 hours -0.5 -0.6 -0.7 -1.4 -2.7
aphid library passed through aphids in food, 72 hours -0.1 -0.4 -0.2 -0.9 -1.8
aphid library passed through aphids in food, 72 hours -0.3 -0.1 -0.6 -0.8 -1.0
stress KB with Plumbagin 10 mM -0.2 +0.2 -1.0 -1.2 -0.2
stress KB with Nitrofurantoin 0.25 mg/ml -0.1 +0.2 -1.0 -1.0 -0.4
in planta apoplastic, grinding recovery; Green bean -1.1 -1.1 +0.1 -0.2 -0.2
carbon source L-Proline (C) +0.0 -0.5 -0.7 -0.4 -0.5
in planta apoplastic; Pepper -0.6 -0.3 -0.6 -0.4 -0.2
in planta epiphytic; Lima bean -0.5 -0.3 -0.4 -0.1 -0.6
carbon source 4-hydroxybutyric (C) -0.3 -0.3 -0.1 -0.5 -0.5
stress KB with Nalidixic 12.5 ug/ml -0.6 -0.4 -0.1 -0.4 -0.1
in planta epiphytic; Lima bean -0.1 -0.4 -0.5 -0.3 -0.5
carbon source D-Mannose (C) -0.0 -0.3 -0.3 -0.4 -0.7
carbon source D-Gluconic (C) -0.2 -0.1 -0.4 -0.4 -0.6
carbon source Glycerol (C) +0.0 -0.3 -0.2 -0.4 -0.6
in planta epiphytic; Lima bean -0.1 -0.2 -0.3 -0.4 -0.6
carbon source 4-Aminobutyric (C) -0.1 -0.3 -0.3 -0.4 -0.4
in planta apoplastic, grinding recovery; Green bean -0.1 -0.9 -0.3 -0.1 -0.1
in planta apoplastic; Pepper -0.2 -0.0 -0.4 -0.5 -0.4
carbon source a-Ketoglutaric (C) -0.2 -0.1 -0.2 -0.3 -0.7
stress KB with Myricetin 10 mM +0.1 -0.3 -0.1 -0.4 -0.7
carbon source Sucrose (C) +0.2 -0.1 -0.5 -0.5 -0.3
stress KB with Veratric Acid 10 mM +0.2 -0.4 +0.2 -0.3 -0.4
stress KB with Ferulic Acid 180 ug/ml -0.6 -0.5 +0.2 +0.0 +0.2
in planta epiphytic; Green bean +0.3 +0.3 -0.6 -0.0 -0.3
in planta apoplastic, sonication recovery; Green bean +0.2 -0.5 +0.4 +0.2 -0.2
stress KB with Fusaric 250 ug/ml -0.1 -0.4 +0.4 -0.3 +0.4
stress KB with Sinomenine 10 mM +0.4 -0.3 +0.4 -0.1 -0.2
stress KB with Methanol 5 vol% +0.0 -0.4 +0.4 +0.0 +0.7
stress KB with Benzalkonium Chloride 6.25 ug/ml +0.2 +0.5 +0.2 +0.3 +0.3
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