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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2965 and Psyr_2966 are separated by 67 nucleotides
Psyr_2966 and Psyr_2967 are separated by 316 nucleotides
Psyr_2967 and Psyr_2968 are separated by 12 nucleotides
Psyr_2968 and Psyr_2969 overlap by 1 nucleotides
Psyr_2965: Psyr_2965 - amino acid ABC transporter ATP-binding protein, PAAT family, at 3,553,271 to 3,554,068
_2965
Psyr_2966: Psyr_2966 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 3,554,136 to 3,556,064
_2966
Psyr_2967: Psyr_2967 - Secretion protein HlyD, at 3,556,381 to 3,557,622
_2967
Psyr_2968: Psyr_2968 - Hydrophobe/amphiphile efflux-1 HAE1, at 3,557,635 to 3,560,826
_2968
Psyr_2969: Psyr_2969 - RND efflux system, outer membrane lipoprotein, NodT, at 3,560,826 to 3,562,223
_2969
Group
Condition
Psyr
_2965
Psyr
_2966
Psyr
_2967
Psyr
_2968
Psyr
_2969
aphid
library passed through aphids in food, 72 hours
-0.5
-0.6
-0.7
-1.4
-2.7
aphid
library passed through aphids in food, 72 hours
-0.1
-0.4
-0.2
-0.9
-1.8
aphid
library passed through aphids in food, 72 hours
-0.3
-0.1
-0.6
-0.8
-1.0
stress
KB with Plumbagin 10 mM
-0.2
+0.2
-1.0
-1.2
-0.2
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.1
+0.2
-1.0
-1.0
-0.4
in planta
apoplastic, grinding recovery; Green bean
-1.1
-1.1
+0.1
-0.2
-0.2
carbon source
L-Proline (C)
+0.0
-0.5
-0.7
-0.4
-0.5
in planta
apoplastic; Pepper
-0.6
-0.3
-0.6
-0.4
-0.2
in planta
epiphytic; Lima bean
-0.5
-0.3
-0.4
-0.1
-0.6
carbon source
4-hydroxybutyric (C)
-0.3
-0.3
-0.1
-0.5
-0.5
stress
KB with Nalidixic 12.5 ug/ml
-0.6
-0.4
-0.1
-0.4
-0.1
in planta
epiphytic; Lima bean
-0.1
-0.4
-0.5
-0.3
-0.5
carbon source
D-Mannose (C)
-0.0
-0.3
-0.3
-0.4
-0.7
carbon source
D-Gluconic (C)
-0.2
-0.1
-0.4
-0.4
-0.6
carbon source
Glycerol (C)
+0.0
-0.3
-0.2
-0.4
-0.6
in planta
epiphytic; Lima bean
-0.1
-0.2
-0.3
-0.4
-0.6
carbon source
4-Aminobutyric (C)
-0.1
-0.3
-0.3
-0.4
-0.4
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.9
-0.3
-0.1
-0.1
in planta
apoplastic; Pepper
-0.2
-0.0
-0.4
-0.5
-0.4
carbon source
a-Ketoglutaric (C)
-0.2
-0.1
-0.2
-0.3
-0.7
stress
KB with Myricetin 10 mM
+0.1
-0.3
-0.1
-0.4
-0.7
carbon source
Sucrose (C)
+0.2
-0.1
-0.5
-0.5
-0.3
stress
KB with Veratric Acid 10 mM
+0.2
-0.4
+0.2
-0.3
-0.4
stress
KB with Ferulic Acid 180 ug/ml
-0.6
-0.5
+0.2
+0.0
+0.2
in planta
epiphytic; Green bean
+0.3
+0.3
-0.6
-0.0
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.2
-0.5
+0.4
+0.2
-0.2
stress
KB with Fusaric 250 ug/ml
-0.1
-0.4
+0.4
-0.3
+0.4
stress
KB with Sinomenine 10 mM
+0.4
-0.3
+0.4
-0.1
-0.2
stress
KB with Methanol 5 vol%
+0.0
-0.4
+0.4
+0.0
+0.7
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.2
+0.5
+0.2
+0.3
+0.3
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