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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2924 and Psyr_2925 overlap by 8 nucleotides
Psyr_2925 and Psyr_2926 are separated by 76 nucleotides
Psyr_2926 and Psyr_2927 are separated by 110 nucleotides
Psyr_2927 and Psyr_2928 are separated by 79 nucleotides
Psyr_2924: Psyr_2924 - conserved hypothetical protein, at 3,512,951 to 3,514,246
_2924
Psyr_2925: Psyr_2925 - Helix-turn-helix motif protein, at 3,514,239 to 3,514,583
_2925
Psyr_2926: Psyr_2926 - General substrate transporter:Major facilitator superfamily, at 3,514,660 to 3,515,865
_2926
Psyr_2927: Psyr_2927 - transcriptional regulator, TetR family, at 3,515,976 to 3,516,602
_2927
Psyr_2928: Psyr_2928 - ABC transporter, transmembrane region:ABC transporter, at 3,516,682 to 3,518,535
_2928
Group
Condition
Psyr
_2924
Psyr
_2925
Psyr
_2926
Psyr
_2927
Psyr
_2928
in planta
apoplastic; Pepper
+0.3
-2.1
-0.1
-0.7
-0.1
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.7
+0.0
-1.7
+0.1
stress
KB with Novobiocin 250 ug/ml
-0.4
-0.2
-0.0
-1.2
-0.3
stress
KB with Flavone 0.25 mg/ml
+0.0
-0.2
-0.3
-1.3
+0.1
in planta
epiphytic; Green bean
+0.1
-0.3
-0.1
-1.4
+0.1
stress
KB with Physcion 10 mM
-0.0
+0.1
-0.1
-1.6
+0.1
stress
KB with Quercetin 360 ug/ml
-0.1
-0.8
+0.3
-0.8
+0.1
in planta
epiphytic; Green bean
+0.1
-0.7
-0.3
-0.9
+0.5
in planta
apoplastic; Pepper
+0.3
-1.3
-0.1
+0.0
-0.2
aphid
library passed through aphids in food, 72 hours
+0.1
-0.5
+0.2
-0.8
-0.1
stress
KB with Gambogic Acid 10 mM
-0.1
-0.2
+0.2
-1.3
+0.3
in planta
apoplastic; Green bean; 6 days
+0.1
+0.7
+0.1
-1.9
+0.2
stress
KB with Cimicifugoside H1 10 mM
-0.1
-0.1
+0.4
-1.1
+0.1
in planta
apoplastic; Green bean; 6 days
+0.1
-0.0
+0.1
-1.3
+0.3
stress
KB with Mitomycin C 0.625 ug/ml
-0.6
-0.4
-0.5
+1.2
-0.4
in planta
apoplastic; Lima bean
-0.1
+0.7
+0.2
-1.0
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.7
-0.1
+0.5
+0.4
stress
KB with Veratrine 10 mM
+0.1
+0.7
+0.2
-0.6
+0.1
stress
KB with Harmol 10 mM
+0.1
+0.6
+0.3
-0.7
+0.3
aphid
library passed through aphids in food, 72 hours
+0.3
+0.9
+0.3
-0.9
+0.1
stress
KB with Paclitaxel 10 mM
+0.3
+0.6
+0.3
-0.5
+0.1
stress
KB with Acridine orange 62.5 ug/ml
-0.2
+0.2
-0.4
+1.6
-0.3
stress
KB with Palmatine chloride 10 mM
+0.1
+0.5
-0.4
+0.6
+0.2
stress
KB with Isoliquiritigenin 10 mM
+0.2
+1.0
+0.3
-0.2
+0.2
in planta
apoplastic; Pepper
+0.2
+0.5
+0.3
+0.8
+0.1
in planta
apoplastic; Lima bean
+0.2
+0.7
+0.3
+0.5
+0.4
in planta
epiphytic; Lima bean
+0.0
+0.7
-0.1
+1.2
+0.3
in planta
epiphytic; Green bean
+0.3
-0.5
+0.7
+2.0
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.2
+0.7
-0.2
+3.1
-0.3
in planta
epiphytic; Green bean
+0.4
-0.1
+0.7
+2.5
+0.4
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