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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2864 and Psyr_2865 overlap by 1 nucleotides
Psyr_2865 and Psyr_2866 are separated by 2 nucleotides
Psyr_2866 and Psyr_2867 are separated by 144 nucleotides
Psyr_2867 and Psyr_2868 overlap by 4 nucleotides
Psyr_2864: Psyr_2864 - RND efflux system, outer membrane lipoprotein, NodT, at 3,435,495 to 3,436,901
_2864
Psyr_2865: Psyr_2865 - Hydrophobe/amphiphile efflux-1 HAE1, at 3,436,901 to 3,440,047
_2865
Psyr_2866: Psyr_2866 - Secretion protein HlyD, at 3,440,050 to 3,441,252
_2866
Psyr_2867: Psyr_2867 - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal, at 3,441,397 to 3,442,788
_2867
Psyr_2868: Psyr_2868 - Response regulator receiver:Transcriptional regulatory protein, C-terminal, at 3,442,785 to 3,443,468
_2868
Group
Condition
Psyr
_2864
Psyr
_2865
Psyr
_2866
Psyr
_2867
Psyr
_2868
stress
KB with Avocatin A 10 mM
-0.1
-0.1
-0.1
-0.2
-1.2
in planta
apoplastic; Lima bean
-0.2
-0.0
-0.3
+0.3
-1.2
stress
KB with Solanesol 10 mM
+0.3
-0.2
-0.0
-0.1
-0.9
stress
KB with Paclitaxel 10 mM
+0.3
-0.2
+0.1
+0.4
-0.6
in planta
apoplastic, grinding recovery; Green bean
+0.1
-0.1
-0.4
+1.1
-0.6
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.0
+0.3
-0.8
+1.6
-0.9
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
+0.2
+0.2
+0.4
+0.2
-0.6
stress
KB with Harmol 10 mM
+0.2
-0.2
-0.3
+0.6
+0.2
stress
KB with Quercetin 360 ug/ml
+0.4
-0.2
-0.2
+0.6
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
-0.1
-0.2
+1.0
-0.3
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
+0.1
-0.8
+2.2
-0.8
stress
KB with Acridine orange 62.5 ug/ml
+0.1
+0.2
-1.1
+1.9
-0.5
in planta
epiphytic; Lima bean
+0.5
-0.0
+0.6
-0.7
+0.4
stress
KB with Ferulic Acid 180 ug/ml
+0.5
+0.1
-0.4
+0.2
+0.4
in planta
apoplastic; Green bean; 13 days
+0.4
+0.3
+0.4
+0.2
-0.5
in planta
epiphytic; Green bean
-0.5
+0.1
+0.3
+0.5
+0.4
stress
KB with Gambogic Acid 10 mM
+0.2
+0.2
+0.3
-0.4
+0.7
stress
KB with Phloretin 250 ug/ml
+0.3
+0.3
+0.3
-0.0
+0.6
stress
KB with Fusaric 250 ug/ml
+0.8
+0.3
-0.0
+0.5
-0.1
stress
KB with Huperzine A 10 mM
+0.2
+0.1
+0.5
+0.5
+0.2
stress
KB with Sclareolide 10 mM
+0.2
+0.1
-0.0
+0.8
+0.4
stress
KB with Erythromycin 25 ug/ml
-0.1
+0.1
+0.6
+0.4
+0.6
stress
KB with Isosafrole 10 mM
+0.4
+0.3
+0.3
+0.3
+0.3
stress
KB with Chloramphenicol 12.5 ug/ml
+0.2
+0.2
+0.1
+0.2
+0.8
stress
KB with Acacetin 10 mM
+0.3
+0.2
+0.5
+0.3
+0.3
aphid
library passed through aphids in food, 72 hours
+0.4
+0.2
-0.2
+0.5
+0.6
in planta
apoplastic, sonication recovery; Green bean
+0.6
-0.1
+0.5
+0.5
+0.1
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.2
+0.1
+0.4
+0.7
+0.3
stress
KB with Fusaric 250 ug/ml
+0.4
+0.2
+0.3
+0.4
+0.6
in planta
apoplastic, sonication recovery; Green bean
+0.7
-0.1
+0.5
+0.8
+0.4
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