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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2836 and Psyr_2837 are separated by 3 nucleotides
Psyr_2837 and Psyr_2838 are separated by 173 nucleotides
Psyr_2838 and Psyr_2839 are separated by 29 nucleotides
Psyr_2839 and Psyr_2840 are separated by 104 nucleotides
Psyr_2836: Psyr_2836 - hypothetical protein, at 3,410,135 to 3,410,761
_2836
Psyr_2837: Psyr_2837 - hypothetical protein, at 3,410,765 to 3,411,730
_2837
Psyr_2838: Psyr_2838 - conserved hypothetical protein, at 3,411,904 to 3,412,251
_2838
Psyr_2839: Psyr_2839 - conserved hypothetical protein, at 3,412,281 to 3,413,093
_2839
Psyr_2840: Psyr_2840 - hypothetical protein, at 3,413,198 to 3,413,788
_2840
Group
Condition
Psyr
_2836
Psyr
_2837
Psyr
_2838
Psyr
_2839
Psyr
_2840
stress
KB with Harmol 10 mM
-0.7
+0.2
-1.5
-0.4
-0.7
in planta
apoplastic; Pepper
-0.5
-0.2
-1.1
-0.1
-0.4
stress
KB with Strychnine Sulfate 10 mM
-0.2
-0.5
-0.4
-0.2
-0.9
stress
KB with Fusaric 250 ug/ml
-0.1
-0.5
-1.4
-0.1
-0.0
in planta
apoplastic, grinding recovery; Green bean
-2.4
-0.1
-0.4
+0.3
+0.5
carbon source
Sucrose (C)
-0.2
+0.2
-1.8
-0.2
+0.0
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.4
-0.1
+0.2
-0.4
-0.9
stress
KB with Conessine 10 mM
-0.3
-0.1
+0.2
-0.2
-1.3
stress
KB with Huperzine A 10 mM
-0.3
-0.3
-0.7
+0.3
-0.6
stress
KB with Avocadene 10 mM
-0.6
-0.3
-0.8
+0.1
+0.3
stress
KB with Aristolochic Acid 10 mM
+0.3
-1.0
-0.6
-0.1
+0.1
stress
KB with Isoliquiritigenin 10 mM
-0.1
+0.0
+0.3
-0.5
-1.0
in planta
apoplastic; Lima bean
+0.8
+0.1
-1.2
-0.6
-0.2
carbon source
Citric Acid (C)
-0.6
+0.4
-0.9
-0.4
+0.4
stress
KB with Acacetin 10 mM
-0.2
-0.6
+0.2
+0.5
-0.9
aphid
library passed through aphids in food, 72 hours
-0.5
-0.1
+0.7
-0.0
-1.1
in planta
apoplastic; Lima bean
+0.6
+0.1
-1.0
-0.3
-0.3
stress
KB with Nalidixic 12.5 ug/ml
+0.0
-1.2
+0.7
-0.1
+0.3
in planta
apoplastic; Pepper
-0.2
-0.3
+1.0
-0.8
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.7
+0.1
-0.2
-0.1
+0.9
in planta
epiphytic; Lima bean
+0.3
-0.1
-0.9
+0.4
+0.3
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.2
-1.1
+0.6
-0.0
+0.2
kb
KB
-0.2
-0.8
+0.2
+0.6
+0.4
stress
KB with Brucine 10 mM
-0.3
-0.6
+0.6
+0.1
+0.5
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.6
-0.8
+0.4
-0.6
+0.9
in planta
apoplastic; Green bean; 13 days
-0.6
-0.5
+1.1
+0.4
+0.2
in planta
epiphytic; Green bean
-0.7
+0.0
+2.3
-0.1
-0.4
aphid
library passed through aphids in food, 72 hours
-0.3
+0.1
+0.5
+0.4
+0.8
in planta
epiphytic; Green bean
+0.1
-0.3
+2.3
+0.1
-0.2
stress
KB with Mitomycin C 0.625 ug/ml
+2.2
+0.5
+1.2
+1.2
+2.2
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