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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2765 and Psyr_2766 are separated by 12 nucleotides
Psyr_2766 and Psyr_2767 overlap by 4 nucleotides
Psyr_2767 and Psyr_2768 are separated by 295 nucleotides
Psyr_2768 and Psyr_2769 are separated by 13 nucleotides
Psyr_2765: Psyr_2765 - conserved domain protein, at 3,352,501 to 3,352,713
_2765
Psyr_2766: Psyr_2766 - conserved hypothetical protein, at 3,352,726 to 3,353,253
_2766
Psyr_2767: Psyr_2767 - Glycoside hydrolase, family 19, at 3,353,250 to 3,353,783
_2767
Psyr_2768: Psyr_2768 - tail fiber assembly domain protein, at 3,354,079 to 3,354,447
_2768
Psyr_2769: Psyr_2769 - conserved hypothetical protein, at 3,354,461 to 3,354,775
_2769
Group
Condition
Psyr
_2765
Psyr
_2766
Psyr
_2767
Psyr
_2768
Psyr
_2769
aphid
library passed through aphids in food, 72 hours
-2.7
N.D.
-0.2
N.D.
-1.0
carbon source
Sucrose (C)
-1.2
N.D.
-0.7
N.D.
-0.5
carbon source
Succinic Acid (C)
-1.4
N.D.
-0.8
N.D.
-0.2
stress
KB with Acridine orange 62.5 ug/ml
+0.8
N.D.
-1.7
N.D.
-1.0
stress
KB with Huperzine A 10 mM
-0.8
N.D.
+0.6
N.D.
-1.4
in planta
epiphytic; Lima bean
+1.0
N.D.
-1.8
N.D.
-0.8
stress
KB with Karanjin 10 mM
-0.5
N.D.
+1.1
N.D.
-1.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
N.D.
+1.0
N.D.
-1.6
stress
KB with Acacetin 10 mM
-0.6
N.D.
+1.0
N.D.
-1.1
stress
KB with Myricetin 10 mM
-0.4
N.D.
+1.1
N.D.
-1.3
stress
KB with Cantharidin 10 mM
-0.5
N.D.
+1.3
N.D.
-1.3
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.2
N.D.
+1.0
N.D.
-1.1
in planta
apoplastic; Pepper
-0.7
N.D.
+1.1
N.D.
-0.7
stress
KB with Oxonitine 10 mM
-0.1
N.D.
+1.3
N.D.
-1.4
stress
KB with Estragole 10 mM
-0.4
N.D.
+1.3
N.D.
-0.8
stress
KB with 2',2'-Bisepigallocatechin Digallate 10 mM
+0.0
N.D.
+1.3
N.D.
-1.1
stress
KB with Xanthyletin 10 mM
+0.1
N.D.
+1.2
N.D.
-1.1
stress
KB with Cimicifugoside H1 10 mM
+0.2
N.D.
+1.6
N.D.
-1.5
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
-0.2
N.D.
+1.5
N.D.
-0.9
stress
KB with Mexicanolide 10 mM
-0.2
N.D.
+1.4
N.D.
-0.8
stress
KB with Anabasine Hydrochloride 10 mM
+0.5
N.D.
+1.4
N.D.
-1.4
stress
KB with Sinomenine 10 mM
+0.4
N.D.
+1.3
N.D.
-1.1
stress
KB with Peucenin 10 mM
+0.2
N.D.
+1.7
N.D.
-1.1
stress
KB with Gambogic Acid 10 mM
-0.4
N.D.
+1.6
N.D.
-0.4
stress
KB with Cyclopamine 10 mM
+0.1
N.D.
+1.5
N.D.
-0.8
stress
KB with Theaflavin 10 mM
+0.1
N.D.
+1.5
N.D.
-0.8
stress
KB with Fumarprotocetraric Acid 10 mM
+0.2
N.D.
+1.7
N.D.
-1.1
stress
KB with Anisodamine Hydrobromide () 10 mM
+1.7
N.D.
+0.6
N.D.
-1.0
in planta
apoplastic; Green bean; 13 days
-0.2
N.D.
+0.7
N.D.
+1.4
stress
KB with Mitomycin C 0.625 ug/ml
+3.8
N.D.
+2.6
N.D.
+1.2
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