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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2697 and Psyr_2698 are separated by 413 nucleotides
Psyr_2698 and Psyr_2699 are separated by 146 nucleotides
Psyr_2699 and Psyr_2700 are separated by 421 nucleotides
Psyr_2700 and Psyr_2701 are separated by 144 nucleotides
Psyr_2697: Psyr_2697 - Glycosyl transferase, family 39, at 3,273,861 to 3,275,342
_2697
Psyr_2698: Psyr_2698 - Ricin B lectin, at 3,275,756 to 3,278,167
_2698
Psyr_2699: Psyr_2699 - conserved hypothetical protein, at 3,278,314 to 3,279,333
_2699
Psyr_2700: Psyr_2700 - PAS, at 3,279,755 to 3,281,359
_2700
Psyr_2701: Psyr_2701 - conserved hypothetical protein, at 3,281,504 to 3,282,646
_2701
Group
Condition
Psyr
_2697
Psyr
_2698
Psyr
_2699
Psyr
_2700
Psyr
_2701
stress
KB with Nalidixic 12.5 ug/ml
-0.5
-0.6
-0.4
-0.2
+0.0
in planta
apoplastic, grinding recovery; Green bean
-0.4
+0.0
-0.6
+0.0
-0.4
aphid
library passed through aphids in food, 72 hours
+0.1
-0.2
-0.5
-0.0
-0.5
carbon source
Sucrose (C)
-0.1
-0.3
-0.5
-0.0
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.1
+0.1
-0.5
-0.1
-0.5
carbon source
4-hydroxybutyric (C)
-0.4
+0.1
-0.4
-0.1
-0.1
stress
KB with Trimethoprim 125 ug/ml
-0.0
-0.7
+0.5
-0.4
+0.1
in planta
epiphytic; Lima bean
-0.2
-0.1
-0.2
-0.2
+0.2
stress
KB with Avocadene 10 mM
-0.1
-0.3
+0.2
-0.3
+0.2
stress
KB with Isovanillin 10 mM
+0.2
-0.5
+0.2
-0.1
-0.1
stress
KB with Aristolochic Acid 10 mM
-0.1
-0.5
+0.5
+0.0
-0.1
stress
KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
-0.0
-0.2
+0.4
-0.1
-0.2
stress
KB with Quercetin 360 ug/ml
+0.1
-0.4
+0.5
-0.2
+0.0
stress
KB with Fusaric 250 ug/ml
+0.2
-0.4
+0.5
-0.3
-0.1
in planta
Green bean; epiphytic
-0.2
-0.1
+0.5
+0.0
-0.2
aphid
library passed through aphids in food, 72 hours
-0.3
+0.2
+0.2
+0.3
-0.3
stress
KB with Cyclopamine 10 mM
+0.3
-0.2
+0.2
-0.1
-0.1
stress
KB with Khayasin C 10 mM
+0.3
-0.2
+0.3
-0.2
-0.1
in planta
apoplastic; Lima bean
+0.1
+0.1
+0.5
+0.2
-0.5
in planta
Green bean; epiphytic
-0.1
-0.1
+0.8
-0.2
-0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.3
-0.1
+0.2
-0.3
+0.3
in planta
epiphytic; Green bean
+0.3
+0.1
-0.1
-0.1
+0.3
stress
KB with Pterin-6-Carboxylic Acid 10 mM
+0.3
-0.2
+0.4
-0.0
+0.1
carbon source
Citric Acid (C)
+0.3
+0.2
-0.0
+0.5
-0.3
in planta
apoplastic; Pepper
+0.4
+0.1
+0.4
-0.1
-0.1
stress
KB with Plumbagin 10 mM
+0.1
-0.2
-0.0
+0.2
+0.6
in planta
epiphytic; Green bean
+0.4
-0.0
-0.4
+0.4
+0.5
stress
KB with Acridine orange 62.5 ug/ml
+0.5
+0.0
+0.0
+0.0
+0.4
in planta
epiphytic; Green bean
+0.3
+0.1
-0.2
+0.2
+0.5
in planta
apoplastic; Green bean; 13 days
+0.1
+0.4
+0.6
+0.1
+0.0
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