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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2694 and Psyr_2695 overlap by 4 nucleotides
Psyr_2695 and Psyr_2696 overlap by 23 nucleotides
Psyr_2696 and Psyr_2697 are separated by 20 nucleotides
Psyr_2697 and Psyr_2698 are separated by 413 nucleotides
Psyr_2694: Psyr_2694 - conserved hypothetical protein, at 3,271,711 to 3,272,037
_2694
Psyr_2695: Psyr_2695 - conserved hypothetical protein, at 3,272,034 to 3,272,468
_2695
Psyr_2696: Psyr_2696 - UDP-glucose 6-dehydrogenase, at 3,272,446 to 3,273,840
_2696
Psyr_2697: Psyr_2697 - Glycosyl transferase, family 39, at 3,273,861 to 3,275,342
_2697
Psyr_2698: Psyr_2698 - Ricin B lectin, at 3,275,756 to 3,278,167
_2698
Group
Condition
Psyr
_2694
Psyr
_2695
Psyr
_2696
Psyr
_2697
Psyr
_2698
aphid
library passed through aphids in food, 72 hours
-1.8
-1.9
+0.6
+0.1
-0.2
stress
KB with Nalidixic 12.5 ug/ml
-0.8
+0.3
-0.6
-0.5
-0.6
stress
KB with Isovanillin 10 mM
+0.4
-0.8
-0.4
+0.2
-0.5
in planta
epiphytic; Green bean
-0.8
-0.1
-0.5
+0.3
+0.1
in planta
epiphytic; Green bean
-0.8
-0.4
-0.2
+0.3
+0.1
in planta
apoplastic, grinding recovery; Green bean
-1.7
+0.5
+0.0
+0.0
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
-0.7
-0.8
+0.4
+0.4
-0.3
in planta
apoplastic, sonication recovery; Green bean
-1.3
+0.4
+0.1
-0.1
+0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.6
-1.0
+0.7
+0.3
-0.1
in planta
apoplastic; Lima bean
+0.8
-0.8
-0.5
-0.1
-0.0
in planta
apoplastic; Lima bean
-0.6
-0.8
+0.6
+0.3
-0.1
stress
KB with Cantharidin 10 mM
-0.6
-0.4
+0.4
+0.2
-0.1
in planta
apoplastic, sonication recovery; Green bean
-1.0
+0.6
-0.1
-0.1
+0.1
aphid
library passed through aphids in food, 72 hours
+0.7
-0.7
+0.2
-0.2
-0.2
stress
KB with Novobiocin 250 ug/ml
+0.8
-0.4
-0.2
+0.1
-0.2
in planta
epiphytic; Lima bean
+0.3
-0.8
+0.3
+0.3
-0.1
stress
KB with Berberine 250 ug/ml
+0.4
+0.6
-0.2
-0.3
-0.2
stress
KB with Biochanin a diacetate 10 mM
+0.8
+0.5
-0.8
+0.0
+0.1
stress
KB with Oxonitine 10 mM
-0.3
+0.8
+0.4
+0.0
-0.2
stress
KB with Trimethoprim 125 ug/ml
+0.3
+0.8
+0.3
-0.0
-0.7
stress
KB with Nonanoic 10 mM
+1.1
+0.2
-0.3
-0.2
+0.2
stress
KB with Lupeol 10 mM
+1.0
+0.2
-0.1
-0.3
+0.1
stress
KB with Acridine orange 62.5 ug/ml
-0.0
-0.4
+0.9
+0.5
+0.0
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+1.0
+0.3
+0.1
-0.2
-0.2
stress
KB with Avocatin A 10 mM
+1.0
+0.5
-0.2
-0.2
+0.1
carbon source
4-hydroxybutyric (C)
+0.7
+0.6
+0.2
-0.4
+0.1
stress
KB with Khayasin C 10 mM
+0.8
+0.6
+0.0
+0.3
-0.2
in planta
apoplastic; Pepper
+1.0
+0.2
-0.2
+0.4
+0.1
carbon source
L-Proline (C)
+0.4
+1.3
+0.1
+0.0
-0.0
carbon source
D-Gluconic (C)
+0.9
+0.3
+0.5
+0.2
+0.1
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