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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2630 and Psyr_2631 are separated by 3 nucleotides
Psyr_2631 and Psyr_2632 overlap by 4 nucleotides
Psyr_2632 and Psyr_2633 are separated by 11 nucleotides
Psyr_2633 and Psyr_2634 are separated by 578 nucleotides
Psyr_2630: Psyr_2630 - conserved hypothetical protein, at 3,191,012 to 3,192,040
_2630
Psyr_2631: Psyr_2631 - HopL1 protein, at 3,192,044 to 3,194,743
_2631
Psyr_2632: Psyr_2632 - virulence protein SrfB, at 3,194,740 to 3,197,874
_2632
Psyr_2633: Psyr_2633 - conserved hypothetical protein, at 3,197,886 to 3,199,241
_2633
Psyr_2634: Psyr_2634 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 3,199,820 to 3,201,448
_2634
Group
Condition
Psyr
_2630
Psyr
_2631
Psyr
_2632
Psyr
_2633
Psyr
_2634
stress
KB with Mitomycin C 0.625 ug/ml
-0.5
+0.0
-0.6
-0.8
-0.1
stress
KB with Novobiocin 250 ug/ml
-0.7
+0.0
-0.4
-0.6
-0.2
stress
KB with Aristolochic Acid 10 mM
-0.6
-0.0
-0.5
-0.6
-0.0
stress
KB with Isovanillin 10 mM
-0.5
-0.5
-0.5
-0.2
+0.2
stress
KB with Methanol 5 vol%
-0.3
-0.1
-0.4
-0.5
-0.1
stress
KB with Leucodin 10 mM
-0.2
-0.4
-0.2
-0.6
+0.0
in planta
apoplastic, grinding recovery; Green bean
-0.5
+0.1
-0.3
-0.4
-0.2
stress
KB with Oxymatrine 10 mM
-0.4
-0.1
-0.3
-0.5
-0.1
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.2
-0.1
-0.6
-0.6
+0.1
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
-0.2
-0.4
-0.2
-0.4
-0.1
stress
KB with Myricetin 10 mM
-0.4
-0.2
-0.2
-0.5
-0.1
stress
KB with capsaicin 0.125 mg/ml
-0.4
-0.3
-0.1
-0.4
-0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.2
-0.2
-0.6
-0.3
-0.0
stress
KB with Harmalol 10 mM
-0.1
-0.0
-0.3
-0.6
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.1
-0.0
-0.9
-0.5
+0.1
stress
KB with Huperzine A 10 mM
-0.5
-0.0
-0.4
-0.3
+0.1
stress
KB with Sparassol 10 mM
-0.7
+0.0
-0.4
-0.2
+0.1
stress
KB with Peucenin 10 mM
-0.4
-0.1
-0.3
-0.3
+0.1
stress
KB with Fusaric 250 ug/ml
-0.4
+0.1
-0.2
-0.6
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.2
+0.2
-0.1
-0.4
-0.3
stress
KB with Chrysin 10 mM
-0.5
-0.1
-0.4
-0.2
+0.4
stress
KB with Trimethoprim 125 ug/ml
-0.5
+0.2
-0.3
-0.4
+0.2
stress
KB with Brucine 10 mM
-0.4
-0.1
-0.4
-0.2
+0.3
aphid
library passed through aphids in food, 72 hours
-0.6
+0.1
+0.2
-0.5
+0.0
stress
KB with Bergenin 10 mM
-0.4
-0.0
-0.3
-0.3
+0.4
in planta
apoplastic; Lima bean
-0.1
+0.3
+0.1
-0.6
-0.2
in planta
apoplastic; Pepper
+0.1
+0.4
-0.1
-0.5
-0.3
stress
KB with Isoliquiritigenin 10 mM
-0.4
+0.2
+0.1
-0.6
+0.4
in planta
apoplastic; Lima bean
-0.2
-0.5
+0.1
-0.1
+0.5
in planta
apoplastic, sonication recovery; Green bean
+0.3
+0.0
-0.7
-0.2
+0.4
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