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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2482 and Psyr_2483 overlap by 4 nucleotides
Psyr_2483 and Psyr_2484 overlap by 4 nucleotides
Psyr_2484 and Psyr_2485 overlap by 4 nucleotides
Psyr_2485 and Psyr_2486 are separated by 169 nucleotides
Psyr_2482: Psyr_2482 - Secretion protein HlyD, at 2,879,475 to 2,880,779
_2482
Psyr_2483: Psyr_2483 - Acriflavin resistance protein, at 2,880,776 to 2,883,886
_2483
Psyr_2484: Psyr_2484 - Acriflavin resistance protein, at 2,883,883 to 2,886,990
_2484
Psyr_2485: Psyr_2485 - RND efflux system, outer membrane lipoprotein, NodT, at 2,886,987 to 2,888,450
_2485
Psyr_2486: Psyr_2486 - diguanylate cyclase/phosphodiesterase, at 2,888,620 to 2,890,731
_2486
Group
Condition
Psyr
_2482
Psyr
_2483
Psyr
_2484
Psyr
_2485
Psyr
_2486
stress
KB with Rifampicin 0.1 mg/ml
-1.7
-2.8
-2.7
-3.2
+0.1
carbon source
4-hydroxybutyric (C)
-0.5
-1.7
-1.4
-1.8
-0.0
carbon source
4-Aminobutyric (C)
-1.0
-1.1
-0.7
-1.2
+0.1
carbon source
L-Proline (C)
-0.7
-0.9
-0.4
-0.5
-0.0
stress
KB with Plumbagin 10 mM
-0.8
-0.8
-0.6
-0.6
+0.2
stress
KB with Berberine 250 ug/ml
-0.6
-0.5
-0.2
-0.7
-0.5
carbon source
Glycerol (C)
+0.1
-0.9
-0.6
-0.6
-0.2
stress
KB with Fusaric 250 ug/ml
-0.1
-0.7
-0.8
-0.6
+0.1
carbon source
Citric Acid (C)
-0.5
-0.7
-0.5
-0.7
+0.1
carbon source
Succinic Acid (C)
-0.6
-0.7
-0.3
-0.4
-0.1
stress
KB with Fusaric 250 ug/ml
-0.3
-0.8
-0.2
-0.5
-0.2
carbon source
Fumaric (C)
-0.1
-0.7
-0.4
-0.6
-0.1
carbon source
Sucrose (C)
+0.1
-0.6
-0.3
-0.4
-0.4
stress
KB with Acriflavine 7.75 ug/ml
-0.3
-0.5
-0.2
-0.3
-0.2
stress
KB with Erythromycin 25 ug/ml
-0.4
-0.4
-0.1
-0.4
-0.1
carbon source
D-Gluconic (C)
-0.1
-0.6
-0.3
-0.5
+0.2
in planta
apoplastic; Lima bean
-0.5
-0.2
-0.2
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
-0.8
+0.2
+0.0
-0.3
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.5
-0.1
-0.1
-0.2
stress
KB with Nalidixic 12.5 ug/ml
-0.5
-0.4
-0.3
-0.1
+0.2
stress
KB with Fusaric 250 ug/ml
-0.0
-0.5
-0.5
-0.3
+0.3
stress
KB with Karanjin 10 mM
-0.2
-0.4
-0.1
-0.3
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.5
-0.2
-0.0
-0.3
-0.2
stress
KB with Terpene 10 mM
-0.4
+0.0
+0.1
-0.3
+0.4
in planta
apoplastic; Pepper
+0.5
+0.1
-0.2
+0.1
+0.2
in planta
apoplastic; Green bean; 13 days
+0.8
-0.2
+0.3
+0.5
-0.4
stress
KB with Mitomycin C 0.625 ug/ml
+0.5
-0.2
+0.0
-0.0
+0.6
in planta
apoplastic; Pepper
+0.6
+0.3
-0.1
+0.0
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.5
+0.1
+0.7
+0.0
+0.5
stress
KB with Acridine orange 62.5 ug/ml
+0.3
-0.0
+0.8
+0.2
+0.6
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