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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2437 and Psyr_2438 are separated by 30 nucleotides
Psyr_2438 and Psyr_2439 are separated by 10 nucleotides
Psyr_2439 and Psyr_2440 are separated by 87 nucleotides
Psyr_2440 and Psyr_2441 are separated by 240 nucleotides
Psyr_2437: Psyr_2437 - mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein, at 2,821,959 to 2,823,065
_2437
Psyr_2438: Psyr_2438 - sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein, at 2,823,096 to 2,823,929
_2438
Psyr_2439: Psyr_2439 - mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein, at 2,823,940 to 2,824,872
_2439
Psyr_2440: Psyr_2440 - mannitol-binding protein / sorbitol-binding protein, at 2,824,960 to 2,826,282
_2440
Psyr_2441: Psyr_2441 - transcriptional regulator, AraC family, at 2,826,523 to 2,827,446
_2441
Group
Condition
Psyr
_2437
Psyr
_2438
Psyr
_2439
Psyr
_2440
Psyr
_2441
carbon source
D-Mannose (C)
-0.8
+0.0
-0.5
-0.8
-1.3
stress
KB with Mitomycin C 0.625 ug/ml
-0.2
-0.7
-0.1
-0.1
-0.6
in planta
epiphytic; Lima bean
-0.3
-0.5
-0.6
-0.1
-0.0
aphid
library passed through aphids in food, 72 hours
-0.2
-0.3
-0.1
-0.3
-0.5
aphid
library passed through aphids in food, 72 hours
+0.3
-0.2
-1.3
+0.3
-0.4
in planta
apoplastic; Lima bean
+0.0
-0.3
-0.2
-0.1
-0.7
in planta
epiphytic; Lima bean
-0.4
-0.3
-0.5
+0.0
+0.1
carbon source
D-Gluconic (C)
+0.1
+0.1
-0.2
-0.4
-0.5
stress
KB with Isovanillin 10 mM
-0.4
-0.2
-0.1
+0.3
-0.6
stress
KB with Aristolochic Acid 10 mM
-0.4
-0.2
+0.3
+0.2
-0.6
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.2
-0.4
+0.2
+0.1
-0.4
in planta
apoplastic; Green bean; 13 days
-1.1
+0.0
+0.7
-0.2
+0.0
stress
KB with Ferulic Acid 180 ug/ml
-0.1
+0.3
+0.2
-0.0
-0.7
stress
KB with Novobiocin 250 ug/ml
+0.0
+0.3
+0.3
-0.3
-0.4
in planta
apoplastic; Pepper
-0.4
+0.5
+0.5
+0.0
-0.8
carbon source
L-Malic (C)
+0.5
+0.2
-0.2
+0.2
-0.6
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.3
+0.7
+0.1
-1.2
stress
KB with Lupeol 10 mM
-0.3
-0.2
+0.5
-0.2
+0.3
stress
KB with Nonanoic 10 mM
-0.5
+0.3
+0.1
-0.1
+0.3
in planta
epiphytic; Green bean
+0.3
+0.5
-0.5
-0.3
+0.2
in planta
apoplastic; Pepper
-0.3
+0.6
+0.4
-0.1
-0.3
in planta
apoplastic, grinding recovery; Green bean
-0.8
+0.5
+0.5
-0.2
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.0
+0.2
+0.7
+0.0
-0.4
stress
KB with Conessine 10 mM
-0.4
+0.1
+0.5
+0.1
+0.2
stress
KB with Resveratrol 10 mM
-0.3
+0.2
+0.5
+0.1
+0.1
carbon source
Sucrose (C)
+0.1
+0.4
-0.3
+0.2
+0.3
stress
KB with Paclitaxel 10 mM
-0.1
+0.2
+0.3
-0.2
+0.4
in planta
epiphytic; Green bean
+0.2
+0.5
+0.0
-0.2
+0.2
in planta
apoplastic; Pepper
+0.2
+0.4
+0.3
+0.1
-0.3
stress
KB with Fumarprotocetraric Acid 10 mM
+0.4
+0.2
+0.2
-0.2
+0.5
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