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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2429 and Psyr_2430 are separated by 89 nucleotides
Psyr_2430 and Psyr_2431 are separated by 302 nucleotides
Psyr_2431 and Psyr_2432 are separated by 197 nucleotides
Psyr_2432 and Psyr_2433 are separated by 168 nucleotides
Psyr_2429: Psyr_2429 - conserved hypothetical protein, at 2,811,116 to 2,812,177
_2429
Psyr_2430: Psyr_2430 - NUDIX hydrolase, at 2,812,267 to 2,812,665
_2430
Psyr_2431: Psyr_2431 - Zinc-containing alcohol dehydrogenase superfamily, at 2,812,968 to 2,814,092
_2431
Psyr_2432: Psyr_2432 - diguanylate cyclase/phosphodiesterase, at 2,814,290 to 2,817,199
_2432
Psyr_2433: Psyr_2433 - conserved hypothetical protein, at 2,817,368 to 2,817,922
_2433
Group
Condition
Psyr
_2429
Psyr
_2430
Psyr
_2431
Psyr
_2432
Psyr
_2433
in planta
epiphytic; Lima bean
-0.2
-0.3
-0.0
-0.0
-0.9
stress
KB with Bergenin 10 mM
-0.1
-0.6
+0.1
-0.1
-0.8
stress
KB with Brucine 10 mM
-0.0
-0.6
+0.1
-0.2
-0.8
in planta
apoplastic; Green bean; 6 days
-0.6
+0.4
-0.2
+0.0
-1.1
stress
KB with Mexicanolide 10 mM
+0.1
-0.5
-0.1
-0.1
-0.7
stress
KB with Chrysin 10 mM
+0.2
-0.5
+0.1
-0.2
-0.8
stress
KB with Usnic Acid 10 mM
+0.2
-0.5
-0.1
-0.0
-0.7
stress
KB with Quinine Hdrochloride 10 mM
+0.1
-0.4
+0.1
-0.1
-0.9
stress
KB with Nalidixic 12.5 ug/ml
+0.4
-0.9
+0.3
-0.2
-0.7
carbon source
4-Aminobutyric (C)
-0.2
+0.2
-0.3
+0.1
-0.8
in planta
apoplastic; Green bean; 6 days
-0.3
+0.3
-0.2
-0.0
-0.8
stress
KB with Khayasin C 10 mM
+0.3
-0.7
+0.1
-0.1
-0.5
stress
KB with Aristolochic Acid 10 mM
+0.2
-0.3
+0.1
-0.1
-0.7
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
-0.6
-0.7
+0.0
+0.6
in planta
apoplastic; Green bean; 13 days
+0.7
-0.2
-0.3
+0.1
-1.0
in planta
epiphytic; Lima bean
+0.2
-1.0
-0.1
+0.1
+0.1
aphid
library passed through aphids in food, 72 hours
-0.0
+0.1
+0.6
-0.3
-0.8
stress
KB with Fusaric 250 ug/ml
+0.1
-0.2
+0.5
-0.0
-0.7
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
-0.2
+0.2
+0.1
-0.8
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.7
-0.1
-0.1
+0.8
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.5
+0.1
-0.0
+0.6
stress
KB with Trimethoprim 125 ug/ml
+0.4
-0.6
+0.4
-0.1
-0.1
stress
KB with Physcion 10 mM
+0.3
-0.7
+0.2
+0.2
+0.3
stress
KB with Erythromycin 25 ug/ml
+0.5
-0.1
+0.4
-0.2
-0.3
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.5
-0.2
+0.5
-0.0
-0.3
aphid
library passed through aphids in food, 72 hours
-0.1
-0.2
+0.7
-0.3
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.0
-0.1
-0.5
+0.2
+0.8
carbon source
D-Mannose (C)
+0.4
+0.6
-0.2
-0.1
-0.2
aphid
library passed through aphids in food, 72 hours
-1.0
-0.5
+1.1
-0.2
+1.0
stress
KB with Carbenicillin 250 ug/ml
+0.5
+0.1
+0.4
-0.0
-0.5
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