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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2425 and Psyr_2426 are separated by 157 nucleotides
Psyr_2426 and Psyr_2427 are separated by 59 nucleotides
Psyr_2427 and Psyr_RNA41 are separated by 182 nucleotides
Psyr_RNA41 and Psyr_2428 are separated by 658 nucleotides
Psyr_2425: Psyr_2425 - hypothetical protein, at 2,806,491 to 2,806,736
_2425
Psyr_2426: Psyr_2426 - conserved domain protein, at 2,806,894 to 2,807,589
_2426
Psyr_2427: Psyr_2427 - gamma-glutamylputrescine oxidase, at 2,807,649 to 2,808,932
_2427
Psyr_RNA41: Psyr_RNA41 - tRNA-Val, at 2,809,115 to 2,809,191
_RNA41
Psyr_2428: Psyr_2428 - GCN5-related N-acetyltransferase, at 2,809,850 to 2,810,326
_2428
Group
Condition
Psyr
_2425
Psyr
_2426
Psyr
_2427
Psyr
_RNA41
Psyr
_2428
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.2
N.D.
-0.4
N.D.
-1.1
stress
KB with Methanol 5 vol%
+0.2
N.D.
-0.5
N.D.
-1.1
stress
KB with Cotarnine Chloride 10 mM
-0.2
N.D.
-0.1
N.D.
-1.0
stress
KB with Chrysin 10 mM
-0.2
N.D.
-0.3
N.D.
-0.8
stress
KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
-0.1
N.D.
-0.2
N.D.
-1.0
stress
KB with Mitomycin C 0.625 ug/ml
+0.4
N.D.
+0.2
N.D.
-1.8
stress
KB with Sinomenine 10 mM
+0.1
N.D.
+0.0
N.D.
-1.3
stress
KB with Methyl 6-Hydroxyangolensate 10 mM
-0.2
N.D.
-0.0
N.D.
-0.9
in planta
apoplastic, sonication recovery; Green bean
+0.1
N.D.
-0.1
N.D.
-1.1
stress
KB with Myricetin 10 mM
-0.1
N.D.
-0.2
N.D.
-0.8
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
N.D.
-0.1
N.D.
-0.8
in planta
apoplastic; Lima bean
-0.2
N.D.
-0.1
N.D.
-0.7
stress
KB with Brucine 10 mM
-0.0
N.D.
-0.1
N.D.
-0.8
stress
KB with Ampicillin 15.6 ug/ml
-0.1
N.D.
+0.0
N.D.
-0.9
stress
KB with Asiaticoside 10 mM
-0.1
N.D.
-0.0
N.D.
-0.8
stress
KB with Avocadene 10 mM
+0.1
N.D.
-0.1
N.D.
-0.9
stress
KB with Irigenin 10 mM
-0.1
N.D.
-0.1
N.D.
-0.7
stress
KB with Cantharidin 10 mM
-0.0
N.D.
-0.4
N.D.
-0.5
stress
KB with Novobiocin 250 ug/ml
+0.4
N.D.
-0.3
N.D.
-1.0
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.1
N.D.
-0.3
N.D.
-0.6
stress
KB with Quinine Hdrochloride 10 mM
+0.2
N.D.
-0.2
N.D.
-0.7
in planta
apoplastic; Green bean; 13 days
+0.7
N.D.
-0.5
N.D.
-0.8
in planta
apoplastic, chopping recovery; Green bean
+0.2
N.D.
+0.0
N.D.
-0.7
stress
KB with Acridine orange 62.5 ug/ml
-0.0
N.D.
+0.4
N.D.
-0.8
stress
KB with Aristolochic Acid 10 mM
+0.3
N.D.
-0.3
N.D.
-0.3
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.2
N.D.
+1.0
N.D.
-0.5
stress
KB with Acriflavine 7.75 ug/ml
-0.2
N.D.
+0.8
N.D.
+0.0
aphid
library passed through aphids in food, 72 hours
+0.0
N.D.
-0.2
N.D.
+0.9
stress
KB with Emodin 10 mM
+0.2
N.D.
+0.1
N.D.
+0.7
in planta
apoplastic; Pepper
+0.3
N.D.
-0.1
N.D.
+1.0
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