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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2354 and Psyr_2355 are separated by 369 nucleotides
Psyr_2355 and Psyr_2356 are separated by 266 nucleotides
Psyr_2356 and Psyr_2357 are separated by 81 nucleotides
Psyr_2357 and Psyr_2358 are separated by 103 nucleotides
Psyr_2354: Psyr_2354 - Taurine catabolism dioxygenase TauD/TfdA, at 2,729,900 to 2,730,739
_2354
Psyr_2355: Psyr_2355 - GAF, at 2,731,109 to 2,731,615
_2355
Psyr_2356: Psyr_2356 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 2,731,882 to 2,733,741
_2356
Psyr_2357: Psyr_2357 - transcriptional regulator, LysR family, at 2,733,823 to 2,734,728
_2357
Psyr_2358: Psyr_2358 - acetylornithine aminotransferase apoenzyme, at 2,734,832 to 2,736,034
_2358
Group
Condition
Psyr
_2354
Psyr
_2355
Psyr
_2356
Psyr
_2357
Psyr
_2358
in planta
apoplastic, grinding recovery; Green bean
-0.8
-0.0
-0.3
-0.2
-1.0
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.2
-0.4
-0.3
-0.0
-0.6
stress
KB with Totarol 10 mM
-0.4
-0.5
-0.4
+0.2
-0.3
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.2
-0.3
-0.6
-0.3
+0.0
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.3
-0.3
-1.1
+0.0
-0.1
stress
KB with Solanesol 10 mM
-0.6
-0.5
+0.0
+0.1
-0.3
carbon source
D-Mannose (C)
-0.8
-0.5
-0.2
+0.1
+0.1
stress
KB with Isovanillin 10 mM
+0.2
+0.1
-1.0
-0.2
-0.2
stress
KB with Ginkgolide A 10 mM
-0.4
-0.1
-0.6
+0.2
-0.2
stress
KB with Prenyletin 10 mM
-0.7
-0.3
-0.2
+0.1
+0.1
aphid
library passed through aphids in food, 72 hours
+0.3
-0.8
-0.7
+0.2
+0.1
stress
KB with Avocadene 10 mM
+0.1
-0.2
-0.7
-0.2
+0.2
stress
KB with Irigenin 10 mM
+0.2
-0.2
-0.7
-0.2
+0.2
stress
KB with Acridine orange 62.5 ug/ml
-0.5
+0.1
-0.8
-0.2
+0.7
stress
KB with Ferulic Acid 180 ug/ml
-0.7
-0.2
+0.1
-0.1
+0.4
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.4
+0.4
-0.4
+0.1
stress
KB with Rotenone 0.25 mg/ml
-0.4
-0.0
-0.5
+0.0
+0.4
in planta
apoplastic; Pepper
-0.2
-0.6
+0.5
-0.2
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
+0.2
-1.0
-0.1
+0.7
in planta
apoplastic; Pepper
-0.2
-0.5
+0.3
+0.0
+0.3
in planta
apoplastic, grinding recovery; Green bean
-0.2
+0.1
-0.5
+0.4
+0.1
stress
KB with Plumbagin 10 mM
+0.3
-0.0
+0.4
+0.2
-0.8
in planta
apoplastic; Lima bean
-0.2
-0.3
+1.0
-0.0
-0.3
in planta
apoplastic; Green bean; 13 days
-0.8
-0.3
+0.7
+0.6
+0.4
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
+0.6
-0.4
-0.0
+0.4
in planta
apoplastic; Pepper
-0.1
+0.7
+0.9
-0.3
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.3
+0.3
-0.1
-0.1
+0.6
in planta
apoplastic; Pepper
-0.0
+0.8
+0.9
-0.4
-0.1
in planta
apoplastic, sonication recovery; Green bean
+0.4
+0.5
-0.1
-0.2
+0.6
aphid
library passed through aphids in food, 72 hours
+0.2
+0.5
+1.2
-0.1
-0.4
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Psyr_2356
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