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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2337 and Psyr_2338 are separated by 65 nucleotides
Psyr_2338 and Psyr_2339 are separated by 50 nucleotides
Psyr_2339 and Psyr_2340 are separated by 129 nucleotides
Psyr_2340 and Psyr_2341 are separated by 119 nucleotides
Psyr_2337: Psyr_2337 - conserved hypothetical protein, at 2,714,622 to 2,715,584
_2337
Psyr_2338: Psyr_2338 - Protein of unknown function DUF1275, at 2,715,650 to 2,716,354
_2338
Psyr_2339: Psyr_2339 - hypothetical protein, at 2,716,405 to 2,716,632
_2339
Psyr_2340: Psyr_2340 - Peptidylprolyl isomerase, FKBP-type, at 2,716,762 to 2,717,136
_2340
Psyr_2341: Psyr_2341 - conserved hypothetical protein, at 2,717,256 to 2,717,537
_2341
Group
Condition
Psyr
_2337
Psyr
_2338
Psyr
_2339
Psyr
_2340
Psyr
_2341
in planta
apoplastic; Lima bean
-1.4
-0.3
-0.9
+0.2
-0.4
stress
KB with Novobiocin 250 ug/ml
-0.8
-0.1
+0.1
-0.4
+0.4
in planta
apoplastic; Green bean; 13 days
+0.2
-0.1
-0.3
-1.7
+1.2
in planta
apoplastic, sonication recovery; Green bean
+0.6
-0.6
-0.8
+0.1
+0.3
stress
KB with Conessine 10 mM
+0.7
-0.2
-0.8
+0.3
-0.2
stress
KB with Flavone 0.125 mg/ml
+0.8
+0.3
-0.4
-0.4
-0.4
stress
KB with Huperzine A 10 mM
-0.3
+0.2
-0.5
+0.6
-0.1
in planta
apoplastic, sonication recovery; Green bean
+0.9
-0.1
-0.7
-0.0
-0.1
in planta
epiphytic; Lima bean
-0.7
+0.6
+0.5
-0.4
-0.0
in planta
epiphytic; Green bean
-0.7
+0.3
+0.4
+0.5
-0.3
aphid
library passed through aphids in food, 72 hours
+0.9
-0.5
+0.1
-0.3
+0.1
carbon source
4-Aminobutyric (C)
-0.8
+0.3
-0.4
+0.7
+0.6
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.9
-0.4
-0.2
-0.1
+0.3
stress
KB with Methyl 6-Hydroxyangolensate 10 mM
+0.4
+0.1
-0.7
+0.6
-0.0
stress
KB with Usnic Acid 10 mM
-0.3
-0.0
-0.4
+1.1
+0.0
in planta
apoplastic, grinding recovery; Green bean
+0.9
-0.0
+0.2
-0.9
+0.3
stress
KB with Rifampicin 0.1 mg/ml
+0.8
+0.2
-0.8
+0.3
-0.0
stress
KB with Strychnine Sulfate 10 mM
+0.7
-0.3
-0.6
+0.7
+0.2
stress
KB with Gossypetin 10 mM
+1.1
+0.3
-0.1
-0.3
-0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.3
+0.1
-0.3
+0.9
-0.1
stress
KB with Dihydrodehydroerosone 10 mM
+0.4
-0.0
-0.3
+1.0
+0.2
stress
KB with Nonanoic 10 mM
+0.5
+0.2
+0.4
+0.4
-0.3
stress
KB with Isosafrole 10 mM
+0.4
-0.0
-0.4
+0.9
+0.4
stress
KB with Nalidixic 12.5 ug/ml
+0.4
+0.1
-0.3
+0.4
+0.7
in planta
apoplastic; Pepper
+0.2
+0.3
+0.6
+0.2
+0.5
in planta
apoplastic; Pepper
+0.5
+0.3
+0.4
-0.1
+0.6
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.5
+0.6
+1.3
+0.3
stress
KB with Acridine orange 62.5 ug/ml
+2.0
+0.5
+0.3
-0.0
+0.5
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+1.9
+0.4
+0.6
+0.3
+0.8
stress
KB with Mitomycin C 0.625 ug/ml
+2.2
-0.1
+0.7
+0.4
+1.0
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