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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2311 and Psyr_2312 are separated by 88 nucleotides
Psyr_2312 and Psyr_2313 are separated by 138 nucleotides
Psyr_2313 and Psyr_2314 are separated by 69 nucleotides
Psyr_2314 and Psyr_2315 are separated by 370 nucleotides
Psyr_2311: Psyr_2311 - conserved hypothetical protein, at 2,685,002 to 2,685,859
_2311
Psyr_2312: Psyr_2312 - Protein of unknown function DUF24, at 2,685,948 to 2,686,412
_2312
Psyr_2313: Psyr_2313 - peptidoglycan glycosyltransferase / cell elongation-specific peptidoglycan D,D-transpeptidase, at 2,686,551 to 2,688,440
_2313
Psyr_2314: Psyr_2314 - pyruvate dehydrogenase (cytochrome), at 2,688,510 to 2,690,315
_2314
Psyr_2315: Psyr_2315 - methyl-accepting chemotaxis sensory transducer, at 2,690,686 to 2,692,647
_2315
Group
Condition
Psyr
_2311
Psyr
_2312
Psyr
_2313
Psyr
_2314
Psyr
_2315
in planta
epiphytic; Lima bean
-0.2
-4.9
+0.4
-0.1
+0.2
in planta
apoplastic, sonication recovery; Green bean
-0.1
-2.7
-0.0
-1.1
-0.2
in planta
apoplastic, sonication recovery; Green bean
+0.1
-2.3
-0.1
-1.2
+0.1
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.5
-0.1
-1.0
-1.2
in planta
apoplastic; Green bean; 13 days
+1.6
-4.3
+0.0
-0.6
+0.4
in planta
apoplastic; Pepper
-0.4
-1.8
-0.1
+0.2
-0.3
in planta
apoplastic; Lima bean
-0.2
-1.7
+0.1
-0.2
-0.1
in planta
epiphytic; Lima bean
-0.8
-0.7
+0.0
-0.6
+0.1
stress
KB with Curcumin 10 mM
-0.4
-0.9
-0.0
-0.5
-0.1
carbon source
Glycerol (C)
+0.1
-1.6
+0.0
-0.3
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
-1.6
+0.1
-0.1
+0.0
stress
KB with Acacetin 10 mM
-0.3
-1.4
-0.0
-0.3
+0.2
stress
KB with Solanesol 10 mM
-0.6
-1.2
-0.0
-0.1
+0.1
stress
KB with Ginkgolide A 10 mM
-0.6
-1.0
+0.2
-0.2
-0.1
stress
KB with Resveratrol 10 mM
-0.3
-1.3
+0.2
-0.1
-0.2
stress
KB with Avocadyne 10 mM
-0.7
-1.0
-0.1
-0.1
+0.2
stress
KB with Nonanoic 10 mM
-0.3
-1.3
+0.2
+0.1
-0.2
aphid
library passed through aphids in food, 24 hours
+0.2
-1.5
+0.0
+0.2
-0.2
carbon source
L-Malic (C)
+0.1
-0.5
-0.9
+0.2
-0.2
aphid
library passed through aphids in food, 72 hours
+0.2
-2.0
+0.0
+0.1
+0.4
in planta
apoplastic; Pepper
+0.1
-1.0
+0.2
+0.2
-0.4
carbon source
Citric Acid (C)
+0.3
-1.0
+0.1
-0.5
+0.2
carbon source
Sucrose (C)
+0.1
-1.3
+0.2
-0.1
+0.3
carbon source
a-Ketoglutaric (C)
+0.5
-1.4
+0.1
-0.0
-0.1
stress
KB with Flavone 0.25 mg/ml
-0.4
-0.9
+0.2
+0.4
+0.3
stress
KB with D-Salicin 240 ug/ml
+0.2
+0.8
+0.1
-0.5
+0.4
in planta
epiphytic; Green bean
-0.4
+1.5
+0.0
+0.2
+0.2
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+4.4
+0.2
-0.7
-0.6
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
+4.2
+0.1
-0.7
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
+0.8
+4.4
+0.2
-0.4
-0.4
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