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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2307 and Psyr_2308 are separated by 129 nucleotides
Psyr_2308 and Psyr_2309 are separated by 63 nucleotides
Psyr_2309 and Psyr_2310 are separated by 291 nucleotides
Psyr_2310 and Psyr_2311 are separated by 97 nucleotides
Psyr_2307: Psyr_2307 - conserved hypothetical protein, at 2,683,144 to 2,683,365
_2307
Psyr_2308: Psyr_2308 - conserved hypothetical protein, at 2,683,495 to 2,683,698
_2308
Psyr_2309: Psyr_2309 - conserved hypothetical protein, at 2,683,762 to 2,684,304
_2309
Psyr_2310: Psyr_2310 - lipoprotein, putative, at 2,684,596 to 2,684,904
_2310
Psyr_2311: Psyr_2311 - conserved hypothetical protein, at 2,685,002 to 2,685,859
_2311
Group
Condition
Psyr
_2307
Psyr
_2308
Psyr
_2309
Psyr
_2310
Psyr
_2311
stress
KB with Palmatine chloride 10 mM
-0.4
N.D.
-0.6
-0.3
-1.0
stress
KB with Mitomycin C 0.625 ug/ml
-0.8
N.D.
-1.3
-0.7
+0.8
stress
KB with Avocadyne 10 mM
-0.2
N.D.
-0.5
-0.5
-0.7
stress
KB with Prenyletin 10 mM
-0.5
N.D.
-0.1
-0.2
-0.8
stress
KB with Levodopa 10 mM
-0.3
N.D.
-0.3
-0.3
-0.5
stress
KB with Isoliquiritigenin 10 mM
-0.2
N.D.
-0.3
-0.4
-0.5
stress
KB with Solanesol 10 mM
-0.2
N.D.
-0.3
-0.4
-0.6
stress
KB with Terpene 10 mM
-0.1
N.D.
-0.6
-0.4
-0.3
stress
KB with L-alliin 10 mM
-0.7
N.D.
-0.1
-0.2
-0.4
in planta
apoplastic; Pepper
-0.0
N.D.
-0.3
-1.1
+0.1
stress
KB with Gossypetin 10 mM
-0.4
N.D.
-0.6
+0.2
-0.5
stress
KB with Paeonol 10 mM
-0.3
N.D.
-0.9
+0.1
-0.0
in planta
apoplastic, chopping recovery; Green bean
+0.2
N.D.
-0.9
-0.2
-0.1
aphid
library passed through aphids in food, 72 hours
+0.4
N.D.
-0.9
-0.9
+0.6
stress
KB with Chaulmoogric 10 mM
-0.2
N.D.
-0.3
+0.5
-0.8
in planta
epiphytic; Green bean
+0.4
N.D.
-0.5
-0.0
-0.5
carbon source
Succinic Acid (C)
+0.2
N.D.
-0.8
-0.2
+0.4
carbon source
Sucrose (C)
-0.6
N.D.
-0.2
+0.5
+0.1
in planta
epiphytic; Green bean
-0.1
N.D.
+0.6
-0.2
-0.6
carbon source
Fumaric (C)
-0.5
N.D.
-0.5
+0.4
+0.4
carbon source
4-hydroxybutyric (C)
-0.2
N.D.
-0.5
+0.7
+0.3
in planta
apoplastic; Lima bean
+0.5
N.D.
+0.4
-0.4
-0.1
carbon source
a-Ketoglutaric (C)
+0.4
N.D.
-0.1
-0.5
+0.5
in planta
epiphytic; Lima bean
+0.4
N.D.
+0.3
+0.6
-0.8
in planta
apoplastic, sonication recovery; Green bean
-0.4
N.D.
+0.6
+0.4
+0.1
carbon source
4-Aminobutyric (C)
-0.2
N.D.
+0.0
+1.0
+0.2
carbon source
D-Mannose (C)
+0.1
N.D.
-0.2
+0.7
+0.5
in planta
apoplastic; Green bean; 13 days
-0.1
N.D.
-0.1
-0.3
+1.6
carbon source
Citric Acid (C)
+0.7
N.D.
+0.3
+0.0
+0.4
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.2
N.D.
+0.5
+0.8
-0.1
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