Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_2281 and Psyr_2282 are separated by 21 nucleotidesPsyr_2282 and Psyr_2283 are separated by 33 nucleotidesPsyr_2283 and Psyr_2284 are separated by 138 nucleotidesPsyr_2284 and Psyr_2285 are separated by 174 nucleotides Psyr_2281: Psyr_2281 - GGDEF domain protein, at 2,648,793 to 2,650,460 _2281 Psyr_2282: Psyr_2282 - Hydrophobe/amphiphile efflux-1 HAE1, at 2,650,482 to 2,653,625 _2282 Psyr_2283: Psyr_2283 - Secretion protein HlyD, at 2,653,659 to 2,654,819 _2283 Psyr_2284: Psyr_2284 - transcriptional regulator, LacI family, at 2,654,958 to 2,655,548 _2284 Psyr_2285: Psyr_2285 - Twin-arginine translocation pathway signal, at 2,655,723 to 2,656,328 _2285
Group Condition Psyr_2281 Psyr_2282 Psyr_2283 Psyr_2284 Psyr_2285
stress KB with Acriflavine 7.75 ug/ml -0.3 -4.0 -3.6 N.D. -0.6
stress KB with Erythromycin 25 ug/ml -0.0 -3.4 -3.2 N.D. +1.6
stress KB with Harmalol 10 mM -0.1 -3.0 -2.7 N.D. +0.9
stress KB with Berberine 250 ug/ml +0.2 -3.4 -2.2 N.D. +0.7
stress KB with Ferulic Acid 180 ug/ml -0.2 -0.1 +0.2 N.D. -3.1
stress KB with Matrine 10 mM -0.2 +0.1 +0.0 N.D. -2.5
stress KB with Acridine orange 62.5 ug/ml +1.0 -0.8 -0.7 N.D. -1.9
in planta apoplastic; Pepper +0.1 -0.1 +0.0 N.D. -2.1
stress KB with Trimethoprim 125 ug/ml +0.0 -0.1 +0.3 N.D. -2.2
stress KB with Nitrofurantoin 0.25 mg/ml -0.0 -0.1 -0.1 N.D. -1.7
stress KB with Fumarprotocetraric Acid 10 mM +0.0 +0.0 -0.1 N.D. -1.9
in planta apoplastic; Green bean; 13 days +0.6 +0.1 -0.9 N.D. -1.6
stress KB with Bergenin 10 mM -0.4 -0.0 +0.2 N.D. -1.4
stress KB with Fusaric 250 ug/ml -0.0 -0.3 +0.3 N.D. -1.5
stress KB with Nalidixic 12.5 ug/ml -0.2 -1.3 -1.0 N.D. +1.4
stress KB with Novobiocin 250 ug/ml +0.4 +0.0 +0.4 N.D. -1.7
stress KB with Benzalkonium Chloride 6.25 ug/ml +1.0 +0.7 +0.1 N.D. -2.5
stress KB with Mitomycin C 0.625 ug/ml +1.1 +0.0 -0.6 N.D. -1.3
carbon source D-Mannose (C) -0.6 -0.1 -0.5 N.D. +0.9
carbon source L-Proline (C) -0.5 -0.1 -0.2 N.D. +1.3
carbon source Citric Acid (C) -0.6 +0.1 -0.1 N.D. +1.1
carbon source D-Gluconic (C) -0.3 -0.2 -0.1 N.D. +1.3
carbon source Succinic Acid (C) -0.4 -0.1 -0.4 N.D. +1.7
carbon source Fumaric (C) -0.3 -0.1 -0.4 N.D. +1.6
carbon source 4-Aminobutyric (C) -0.4 +0.1 -0.4 N.D. +1.6
carbon source Glycerol (C) -0.2 -0.3 -0.3 N.D. +2.0
in planta apoplastic, grinding recovery; Green bean -0.2 -0.2 +0.3 N.D. +1.4
in planta apoplastic, chopping recovery; Green bean +0.2 -0.1 -0.3 N.D. +1.8
in planta apoplastic; Lima bean +0.6 +0.2 +0.2 N.D. +1.0
in planta apoplastic; Lima bean +0.8 +0.1 +0.2 N.D. +1.8
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