Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_2243 and Psyr_2244 are separated by 63 nucleotidesPsyr_2244 and Psyr_2245 are separated by 170 nucleotidesPsyr_2245 and Psyr_2246 are separated by 291 nucleotidesPsyr_2246 and Psyr_2247 are separated by 227 nucleotides Psyr_2243: Psyr_2243 - Endoribonuclease L-PSP, at 2,607,675 to 2,608,076 _2243 Psyr_2244: Psyr_2244 - DNA topoisomerase III, at 2,608,140 to 2,610,110 _2244 Psyr_2245: Psyr_2245 - conserved domain protein, at 2,610,281 to 2,611,150 _2245 Psyr_2246: Psyr_2246 - Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer, at 2,611,442 to 2,613,331 _2246 Psyr_2247: Psyr_2247 - ABC transporter, at 2,613,559 to 2,614,392 _2247
Group Condition Psyr_2243 Psyr_2244 Psyr_2245 Psyr_2246 Psyr_2247
in planta apoplastic; Pepper -0.5 +0.1 -2.6 -0.4 +0.5
in planta apoplastic; Pepper +0.6 -1.1 -2.6 +0.1 +0.2
in planta Green bean; epiphytic -0.5 -1.1 -0.6 -0.1 -0.5
in planta apoplastic; Pepper +0.6 -1.7 -1.8 -0.1 +0.4
in planta apoplastic; Green bean; 6 days -0.6 -0.6 -1.7 +0.2 +0.2
in planta apoplastic; Lima bean +0.1 -1.3 -0.9 +0.1 +0.2
in planta epiphytic; Green bean +0.1 -2.2 +0.5 +0.1 +0.1
carbon source D-Gluconic (C) -0.5 -0.4 -0.9 +0.1 +0.6
carbon source Sucrose (C) -0.1 -1.0 -0.8 +0.0 +1.0
stress KB with Nalidixic 12.5 ug/ml -1.4 -0.4 +0.4 +0.1 +0.6
stress KB with Gossypetin 10 mM +0.7 +0.2 -1.7 +0.2 +0.1
carbon source L-Proline (C) -0.5 -0.6 -0.2 +0.1 +1.0
in planta apoplastic; Green bean; 13 days -0.7 -0.7 -0.1 -0.2 +1.5
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.6 +0.0 -1.2 +0.1 +0.5
stress KB with Trimethoprim 125 ug/ml -1.0 +1.5 +0.3 +0.3 -0.7
in planta epiphytic; Lima bean -0.8 +0.8 -0.7 +0.2 +0.8
in planta apoplastic, chopping recovery; Green bean +0.2 -1.1 +0.2 +0.4 +1.0
stress KB with Prenyletin 10 mM +0.6 +0.6 -0.9 +0.2 +0.2
aphid library passed through aphids in food, 72 hours -0.1 -0.8 +0.9 +0.6 +0.1
stress KB with Conessine 10 mM +0.5 +0.2 -0.8 +0.4 +0.5
stress KB with Methanol 5 vol% +0.8 +0.1 -1.0 +0.3 +0.8
stress KB with Carbenicillin 250 ug/ml -0.8 +1.2 +0.5 +0.0 +0.1
in planta epiphytic; Lima bean +0.2 +1.0 +0.1 -0.8 +0.8
stress KB with Berberine 250 ug/ml +0.2 +0.8 +0.9 +0.2 -0.5
stress KB with Ferulic Acid 180 ug/ml +0.9 +0.8 -0.2 -0.2 +0.5
stress KB with Fusaric 250 ug/ml +0.7 +0.4 +0.4 -0.1 +0.7
stress KB with Quercetin 360 ug/ml +0.8 +0.8 +0.1 +0.1 +1.0
stress KB with Acridine orange 62.5 ug/ml +2.0 +1.8 +0.5 +0.2 +0.1
stress KB with Mitomycin C 0.625 ug/ml +2.9 +1.7 +1.1 +0.1 -0.4
stress KB with Benzalkonium Chloride 6.25 ug/ml +3.0 +2.2 +0.8 +0.3 +0.4
remove
Psyr_2243
plot		 remove
Psyr_2244
plot		 remove
Psyr_2245		 remove
Psyr_2246
plot		 remove
Psyr_2247
plot