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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2206 and Psyr_2207 overlap by 4 nucleotides
Psyr_2207 and Psyr_2208 are separated by 223 nucleotides
Psyr_2208 and Psyr_2209 are separated by 60 nucleotides
Psyr_2209 and Psyr_2210 are separated by 76 nucleotides
Psyr_2206: Psyr_2206 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 2,563,580 to 2,564,728
_2206
Psyr_2207: Psyr_2207 - ANTAR, at 2,564,725 to 2,565,357
_2207
Psyr_2208: Psyr_2208 - Amidase, at 2,565,581 to 2,567,116
_2208
Psyr_2209: Psyr_2209 - ABC transporter, substrate-binding protein, aliphatic sulfonate, at 2,567,177 to 2,568,151
_2209
Psyr_2210: Psyr_2210 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein, at 2,568,228 to 2,569,187
_2210
Group
Condition
Psyr
_2206
Psyr
_2207
Psyr
_2208
Psyr
_2209
Psyr
_2210
in planta
apoplastic, grinding recovery; Green bean
-0.2
N.D.
-1.0
-0.6
-0.5
carbon source
Citric Acid (C)
-0.1
N.D.
-0.0
-0.5
-0.9
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.1
N.D.
+0.2
-1.0
-0.6
in planta
apoplastic, grinding recovery; Green bean
-0.1
N.D.
-0.9
-0.7
+0.2
stress
KB with Fusaric 250 ug/ml
-0.1
N.D.
-0.0
-0.9
-0.3
stress
KB with Aristolochic Acid 10 mM
-0.2
N.D.
+0.1
-0.9
-0.3
stress
KB with Peucenin 10 mM
+0.0
N.D.
+0.0
-0.6
-0.7
stress
KB with Ampicillin 15.6 ug/ml
-0.1
N.D.
+0.0
-0.6
-0.5
stress
KB with Acridine orange 62.5 ug/ml
-0.5
N.D.
+0.3
-1.5
+0.6
in planta
apoplastic; Green bean; 13 days
-0.4
N.D.
-0.6
-1.0
+1.0
stress
KB with 2',2'-Bisepigallocatechin Digallate 10 mM
+0.1
N.D.
+0.3
-0.7
-0.4
carbon source
Sucrose (C)
-0.4
N.D.
+0.4
-0.5
-0.1
stress
KB with Sclareolide 10 mM
-0.3
N.D.
+0.3
-0.5
-0.1
aphid
library passed through aphids in food, 72 hours
+0.2
N.D.
-0.2
+0.2
-0.8
stress
KB with Mitomycin C 0.625 ug/ml
-0.7
N.D.
+0.8
-1.0
+0.4
in planta
apoplastic; Green bean; 6 days
+0.1
N.D.
+0.3
+0.1
-0.9
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
N.D.
+0.7
-1.2
+0.6
stress
KB with Gambogic Acid 10 mM
+0.3
N.D.
+0.1
-0.8
+0.1
in planta
apoplastic; Green bean; 6 days
+0.0
N.D.
+0.2
+0.4
-0.7
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
N.D.
+0.1
+0.6
-0.5
aphid
library passed through aphids in food, 72 hours
-0.1
N.D.
+0.5
+0.3
-0.6
stress
KB with Palmatine chloride 10 mM
-0.2
N.D.
+0.3
+0.5
-0.4
in planta
apoplastic, sonication recovery; Green bean
+0.0
N.D.
+0.3
-0.7
+0.8
stress
KB with Cantharidin 10 mM
+0.1
N.D.
+0.3
+0.6
-0.5
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
-0.3
N.D.
+0.2
+0.5
+0.4
in planta
apoplastic, sonication recovery; Green bean
+0.2
N.D.
+0.3
-0.6
+0.9
stress
KB with Biochanin a diacetate 10 mM
-0.1
N.D.
+0.5
+0.6
+0.1
stress
KB with Piperic 10 mM
-0.1
N.D.
+0.4
+0.4
+0.5
stress
KB with Prenyletin 10 mM
-0.0
N.D.
+0.3
+0.5
+0.4
in planta
apoplastic; Pepper
+0.2
N.D.
+0.1
+0.3
+0.7
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