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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2143 and Psyr_2144 are separated by 102 nucleotides
Psyr_2144 and Psyr_2145 are separated by 87 nucleotides
Psyr_2145 and Psyr_2146 overlap by 4 nucleotides
Psyr_2146 and Psyr_2147 are separated by 74 nucleotides
Psyr_2143: Psyr_2143 - delta1-piperideine 2-carboxylate reductase, at 2,502,154 to 2,503,185
_2143
Psyr_2144: Psyr_2144 - conserved hypothetical protein, at 2,503,288 to 2,503,485
_2144
Psyr_2145: Psyr_2145 - conserved domain protein, at 2,503,573 to 2,503,830
_2145
Psyr_2146: Psyr_2146 - methionine aminopeptidase, type I, at 2,503,827 to 2,504,618
_2146
Psyr_2147: Psyr_2147 - conserved hypothetical protein, at 2,504,693 to 2,504,929
_2147
Group
Condition
Psyr
_2143
Psyr
_2144
Psyr
_2145
Psyr
_2146
Psyr
_2147
stress
KB with Anisodamine Hydrobromide () 10 mM
-2.5
-0.8
N.D.
+0.2
+0.3
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-2.5
-0.7
N.D.
+0.1
+0.3
stress
KB with Chaulmoogric 10 mM
-1.2
-1.0
N.D.
-0.2
-0.1
stress
KB with Prenyletin 10 mM
-1.1
-0.7
N.D.
-0.1
-0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
-1.8
-0.2
N.D.
+0.0
-0.2
stress
KB with Avocatin A 10 mM
-0.9
-0.9
N.D.
-0.2
-0.1
stress
KB with Solanesol 10 mM
-1.6
-0.5
N.D.
-0.0
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
-2.1
-0.3
N.D.
+0.6
-0.1
stress
KB with dihydrojasmonic, methyl ester 10 mM
-1.3
-0.5
N.D.
-0.1
+0.1
stress
KB with Myricetin 10 mM
-2.0
+0.1
N.D.
-0.0
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.6
-1.3
N.D.
-0.2
-0.5
carbon source
Sucrose (C)
-1.4
+0.5
N.D.
-0.1
-0.1
in planta
epiphytic; Green bean
-1.2
+0.5
N.D.
+0.1
-0.5
carbon source
4-hydroxybutyric (C)
-1.6
+0.8
N.D.
-0.0
+0.1
in planta
epiphytic; Green bean
-1.1
+0.5
N.D.
+0.2
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-1.7
+0.7
N.D.
+0.0
+0.3
stress
KB with Plumbagin 10 mM
-1.1
-0.4
N.D.
+0.4
+0.4
stress
KB with Arecoline Hydrobromide 10 mM
-1.3
+0.7
N.D.
+0.1
-0.0
carbon source
Fumaric (C)
-1.4
+0.5
N.D.
+0.0
+0.4
stress
KB with Chrysin 10 mM
-1.0
+0.6
N.D.
-0.1
+0.3
stress
KB with Fusaric 250 ug/ml
-1.3
-0.3
N.D.
+1.5
+0.0
stress
KB with Mexicanolide 10 mM
-1.0
+0.8
N.D.
+0.1
+0.3
stress
KB with Acridine orange 62.5 ug/ml
-0.6
+1.0
N.D.
-0.2
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.8
+1.2
N.D.
-0.2
+0.2
in planta
apoplastic; Lima bean
-0.5
+0.7
N.D.
+0.0
+0.7
stress
KB with Fusaric 250 ug/ml
-0.7
+1.0
N.D.
+0.6
+0.0
stress
KB with Nalidixic 12.5 ug/ml
-0.2
-0.7
N.D.
+2.2
+0.2
aphid
library passed through aphids in food, 72 hours
+1.5
+0.2
N.D.
+0.3
-0.2
aphid
library passed through aphids in food, 72 hours
+1.6
+1.0
N.D.
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
+1.0
+1.2
N.D.
+0.2
-0.3
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