Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_2027 and Psyr_2028 are separated by 127 nucleotidesPsyr_2028 and Psyr_2029 are separated by 69 nucleotidesPsyr_2029 and Psyr_2030 are separated by 45 nucleotidesPsyr_2030 and Psyr_2031 are separated by 115 nucleotides Psyr_2027: Psyr_2027 - epoxide hydrolase, Serine peptidase, MEROPS family S33, at 2,351,440 to 2,352,294 _2027 Psyr_2028: Psyr_2028 - conserved hypothetical protein, at 2,352,422 to 2,353,252 _2028 Psyr_2029: Psyr_2029 - Protein of unknown function UPF0118, at 2,353,322 to 2,354,368 _2029 Psyr_2030: Psyr_2030 - Calcium-binding EF-hand, at 2,354,414 to 2,355,169 _2030 Psyr_2031: Psyr_2031 - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal, at 2,355,285 to 2,356,319 _2031
Group Condition Psyr_2027 Psyr_2028 Psyr_2029 Psyr_2030 Psyr_2031
in planta apoplastic; Green bean; 13 days -0.2 -0.8 +0.2 -1.3 -2.2
in planta apoplastic; Pepper +0.0 -0.0 -0.3 -0.8 -1.4
aphid library passed through aphids in food, 72 hours -0.3 -0.0 +0.0 +0.0 -1.9
stress KB with Quercetin 360 ug/ml -0.1 -0.4 +0.1 -1.2 -0.2
in planta apoplastic; Pepper +0.1 +0.2 -0.4 -0.1 -1.5
stress KB with Cotarnine Chloride 10 mM +0.2 -0.2 -0.1 -0.9 -0.5
stress KB with Novobiocin 250 ug/ml -0.2 -0.5 +0.6 -0.9 -0.3
stress KB with Piperic 10 mM +0.1 +0.1 -0.6 -1.1 +0.3
in planta apoplastic; Green bean; 6 days +0.3 -0.1 +0.1 -0.3 -1.1
stress KB with Carnitine (Dl) Hydrochloride 10 mM +0.2 +0.2 -0.4 -0.2 -1.0
stress KB with Karanjin 10 mM +0.3 +0.1 -0.1 -1.1 -0.4
stress MBOA 0.5 mM -0.2 +0.3 +0.2 -1.5 +0.3
in planta apoplastic, grinding recovery; Green bean +0.4 -0.2 +0.8 -0.0 -2.0
carbon source 4-hydroxybutyric (C) -0.2 +0.3 -0.5 +0.7 -0.7
in planta epiphytic; Lima bean +0.3 +0.7 +0.3 -1.3 -0.2
stress KB with Acridine orange 62.5 ug/ml +0.4 +0.7 -0.3 -0.8 -0.1
stress KB with Benzalkonium Chloride 6.25 ug/ml +0.5 +0.6 +0.1 -0.8 -0.5
stress KB with Gambogic Acid 10 mM +0.2 +0.4 +0.4 -0.5 -0.4
nophagecontrol TIme6-nophage +0.2 +0.3 -0.4 +0.6 -0.4
stress KB with Isovanillin 10 mM +0.3 +0.5 -0.3 +0.3 -0.5
in planta epiphytic; Green bean -0.4 +0.3 +0.9 +0.1 -0.4
stress KB with Nalidixic 12.5 ug/ml +0.1 +0.2 -0.3 +1.3 -0.4
stress KB with Mitomycin C 0.625 ug/ml +0.1 +0.9 +0.4 +0.5 -1.0
in planta apoplastic, chopping recovery; Green bean +0.1 -0.1 +0.2 +1.1 -0.4
in planta epiphytic; Green bean -0.1 +0.1 +0.4 +1.3 -0.5
in planta Green bean; epiphytic +0.3 -0.3 +0.3 +0.4 +0.6
in planta apoplastic, grinding recovery; Green bean -0.1 -0.6 +1.6 +0.4 +0.2
kb KB +0.2 +0.5 -0.3 +0.9 +0.2
in planta epiphytic; Lima bean -0.3 +0.2 +0.4 +0.6 +0.5
in planta epiphytic; Green bean -0.1 +0.2 +0.5 +1.0 +0.3
remove
Psyr_2027
plot
remove
Psyr_2028
plot
remove
Psyr_2029
remove
Psyr_2030
plot
remove
Psyr_2031
plot