Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_2024 and Psyr_2025 are separated by 62 nucleotidesPsyr_2025 and Psyr_2026 are separated by 250 nucleotidesPsyr_2026 and Psyr_2027 overlap by 4 nucleotidesPsyr_2027 and Psyr_2028 are separated by 127 nucleotides Psyr_2024: Psyr_2024 - Phosphohistidine phosphatase SixA, at 2,349,422 to 2,349,877 _2024 Psyr_2025: Psyr_2025 - Phenylacetic acid degradation-related protein, at 2,349,940 to 2,350,383 _2025 Psyr_2026: Psyr_2026 - conserved hypothetical protein, at 2,350,634 to 2,351,443 _2026 Psyr_2027: Psyr_2027 - epoxide hydrolase, Serine peptidase, MEROPS family S33, at 2,351,440 to 2,352,294 _2027 Psyr_2028: Psyr_2028 - conserved hypothetical protein, at 2,352,422 to 2,353,252 _2028
Group Condition Psyr_2024 Psyr_2025 Psyr_2026 Psyr_2027 Psyr_2028
stress KB with Novobiocin 250 ug/ml N.D. -0.4 -0.2 -0.2 -0.5
stress KB with D-Salicin 240 ug/ml N.D. -0.3 -0.3 -0.0 -0.5
stress KB with Ferulic Acid 180 ug/ml N.D. -0.3 -0.6 +0.1 -0.4
in planta apoplastic; Green bean; 13 days N.D. -0.8 +0.7 -0.2 -0.8
aphid library passed through aphids in food, 72 hours N.D. -0.0 -0.3 -0.1 -0.6
in planta epiphytic; Lima bean N.D. -0.4 -0.3 -0.3 +0.2
in planta apoplastic; Lima bean N.D. -0.3 -0.6 -0.1 +0.1
in planta apoplastic; Green bean; 6 days N.D. -0.2 -0.7 +0.3 -0.1
stress KB with Harmol 10 mM N.D. +0.3 -0.4 -0.0 -0.6
in planta apoplastic, grinding recovery; Green bean N.D. -0.4 -0.1 +0.4 -0.2
in planta epiphytic; Green bean N.D. +0.1 -0.3 -0.4 +0.3
stress KB with Harmalol 10 mM N.D. -0.3 +0.3 +0.1 -0.4
stress KB with Sclareolide 10 mM N.D. +0.3 -0.6 +0.2 -0.1
stress KB with Carnitine (Dl) Hydrochloride 10 mM N.D. -0.7 +0.4 +0.2 +0.2
mixed community Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant N.D. +0.3 -0.6 -0.0 +0.4
in planta epiphytic; Lima bean N.D. -0.4 -0.4 +0.3 +0.7
stress KB with Mitomycin C 0.625 ug/ml N.D. -0.4 -0.5 +0.1 +0.9
kb KB N.D. -0.2 -0.3 +0.2 +0.5
stress KB with Acridine orange 62.5 ug/ml N.D. -0.5 -0.2 +0.4 +0.7
stress KB with Isovanillin 10 mM N.D. -0.2 -0.1 +0.3 +0.5
carbon source D-Mannose (C) N.D. +0.2 +0.3 -0.2 +0.4
stress KB with Sinomenine 10 mM N.D. -0.2 +0.3 +0.4 +0.2
carbon source D-Gluconic (C) N.D. +0.1 +0.6 -0.1 +0.2
in planta epiphytic; Green bean N.D. +0.5 +0.4 -0.1 +0.2
stress KB with Benzalkonium Chloride 6.25 ug/ml N.D. -0.2 +0.1 +0.5 +0.6
in planta epiphytic; Lima bean N.D. +0.1 +0.8 +0.2 -0.1
carbon source Fumaric (C) N.D. +0.3 +0.5 -0.1 +0.3
stress KB with Plumbagin 10 mM N.D. +0.1 +0.7 +0.2 +0.2
in planta apoplastic, sonication recovery; Green bean N.D. +0.1 +0.9 +0.1 +0.3
in planta apoplastic, sonication recovery; Green bean N.D. +0.2 +1.0 +0.4 +0.2
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