Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_2000 and Psyr_2001 are separated by 114 nucleotides
Psyr_2001 and Psyr_2002 are separated by 94 nucleotides
Psyr_2002 and Psyr_2003 are separated by 74 nucleotides
Psyr_2003 and Psyr_2004 are separated by 66 nucleotides
Psyr_2000: Psyr_2000 - transcriptional regulator, GntR family, at 2,321,239 to 2,322,678
_2000
Psyr_2001: Psyr_2001 - conserved hypothetical protein, at 2,322,793 to 2,323,434
_2001
Psyr_2002: Psyr_2002 - Protein of unknown function UPF0153, at 2,323,529 to 2,323,786
_2002
Psyr_2003: Psyr_2003 - conserved hypothetical protein, at 2,323,861 to 2,324,454
_2003
Psyr_2004: Psyr_2004 - citrate synthase, at 2,324,521 to 2,325,810
_2004
Group
Condition
Psyr
_2000
Psyr
_2001
Psyr
_2002
Psyr
_2003
Psyr
_2004
in planta
apoplastic, sonication recovery; Green bean
-0.5
N.D.
N.D.
-0.2
N.D.
in planta
apoplastic, sonication recovery; Green bean
-0.5
N.D.
N.D.
-0.1
N.D.
stress
KB with Acriflavine 7.75 ug/ml
-0.4
N.D.
N.D.
-0.1
N.D.
stress
KB with Acridine orange 62.5 ug/ml
-0.5
N.D.
N.D.
+0.1
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.5
N.D.
N.D.
+0.3
N.D.
in planta
apoplastic; Lima bean
-0.3
N.D.
N.D.
+0.2
N.D.
stress
KB with Cantharidin 10 mM
+0.2
N.D.
N.D.
-0.3
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
N.D.
N.D.
+0.4
N.D.
stress
KB with L-alliin 10 mM
-0.1
N.D.
N.D.
+0.3
N.D.
stress
KB with Aristolochic Acid 10 mM
+0.2
N.D.
N.D.
+0.2
N.D.
stress
KB with Prenyletin 10 mM
+0.3
N.D.
N.D.
+0.1
N.D.
stress
KB with Paclitaxel 10 mM
+0.3
N.D.
N.D.
+0.1
N.D.
in planta
apoplastic; Green bean; 6 days
+0.1
N.D.
N.D.
+0.4
N.D.
stress
KB with Curcumin 10 mM
+0.2
N.D.
N.D.
+0.3
N.D.
stress
KB with Carbenicillin 250 ug/ml
+0.2
N.D.
N.D.
+0.3
N.D.
stress
KB with Methyl 6-Hydroxyangolensate 10 mM
+0.3
N.D.
N.D.
+0.2
N.D.
stress
DMSO
+0.3
N.D.
N.D.
+0.2
N.D.
aphid
library passed through aphids in food, 72 hours
+0.2
N.D.
N.D.
+0.3
N.D.
stress
KB with Nonanoic 10 mM
+0.3
N.D.
N.D.
+0.2
N.D.
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.2
N.D.
N.D.
+0.2
N.D.
stress
KB with Avocatin B 10 mM
+0.3
N.D.
N.D.
+0.2
N.D.
stress
KB with Fusaric 250 ug/ml
+0.4
N.D.
N.D.
+0.1
N.D.
in planta
apoplastic; Green bean; 13 days
+0.4
N.D.
N.D.
+0.1
N.D.
stress
KB with Nalidixic 12.5 ug/ml
+0.1
N.D.
N.D.
+0.5
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
N.D.
N.D.
+0.3
N.D.
stress
KB with dihydrojasmonic, methyl ester 10 mM
+0.1
N.D.
N.D.
+0.4
N.D.
stress
KB with Veratrine 10 mM
+0.2
N.D.
N.D.
+0.3
N.D.
stress
KB with Isoliquiritigenin 10 mM
+0.2
N.D.
N.D.
+0.4
N.D.
kb
KB
+0.3
N.D.
N.D.
+0.3
N.D.
stress
KB with Novobiocin 250 ug/ml
+0.2
N.D.
N.D.
+0.4
N.D.
remove
Psyr_2000
plot
remove
Psyr_2001
plot
remove
Psyr_2002
remove
Psyr_2003
plot
remove
Psyr_2004
plot