Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_1997 and Psyr_1998 are separated by 10 nucleotidesPsyr_1998 and Psyr_1999 overlap by 4 nucleotidesPsyr_1999 and Psyr_2000 are separated by 217 nucleotidesPsyr_2000 and Psyr_2001 are separated by 114 nucleotides Psyr_1997: Psyr_1997 - amino acid ABC transporter substrate-binding protein, PAAT family, at 2,319,018 to 2,319,845 _1997 Psyr_1998: Psyr_1998 - lipoprotein, putative, at 2,319,856 to 2,320,209 _1998 Psyr_1999: Psyr_1999 - OmpA/MotB, at 2,320,206 to 2,321,021 _1999 Psyr_2000: Psyr_2000 - transcriptional regulator, GntR family, at 2,321,239 to 2,322,678 _2000 Psyr_2001: Psyr_2001 - conserved hypothetical protein, at 2,322,793 to 2,323,434 _2001
Group Condition Psyr_1997 Psyr_1998 Psyr_1999 Psyr_2000 Psyr_2001
in planta apoplastic, grinding recovery; Green bean -0.4 -5.3 -0.7 -0.3 N.D.
in planta apoplastic, grinding recovery; Green bean +0.2 -0.9 -1.3 -0.1 N.D.
in planta apoplastic, sonication recovery; Green bean -0.2 -1.3 +0.3 -0.5 N.D.
carbon source Sucrose (C) -0.1 -1.2 -0.4 +0.0 N.D.
in planta epiphytic; Lima bean -0.2 -1.3 +0.2 -0.1 N.D.
in planta apoplastic; Lima bean +0.2 -0.9 -0.3 -0.2 N.D.
in planta apoplastic, sonication recovery; Green bean +0.4 -0.8 -0.1 -0.5 N.D.
in planta apoplastic; Lima bean +0.7 -0.5 -0.3 -0.3 N.D.
in planta epiphytic; Green bean +0.4 -1.1 +0.4 -0.1 N.D.
carbon source Fumaric (C) +0.6 -0.7 -0.2 +0.0 N.D.
stress KB with Brucine 10 mM +0.5 -0.9 +0.0 +0.1 N.D.
aphid library passed through aphids in food, 72 hours +0.1 -1.5 +1.0 +0.2 N.D.
stress KB with Acriflavine 7.75 ug/ml -0.1 +1.0 -0.4 -0.4 N.D.
stress KB with Trimethoprim 125 ug/ml -0.5 +0.5 +0.4 -0.2 N.D.
stress KB with Berberine 250 ug/ml -0.5 +0.5 +0.3 -0.2 N.D.
stress KB with Anisodamine Hydrobromide () 10 mM +0.1 -0.6 +0.6 +0.2 N.D.
stress KB with Chloramphenicol 12.5 ug/ml -0.4 +0.6 +0.5 -0.0 N.D.
stress KB with Acridine orange 62.5 ug/ml +1.1 -0.1 +0.5 -0.5 N.D.
in planta apoplastic; Green bean; 13 days -0.3 -0.4 +1.4 +0.4 N.D.
stress KB with Erythromycin 25 ug/ml -0.3 +0.7 +0.6 +0.1 N.D.
stress KB with Theaflavin 10 mM +0.9 -0.2 +0.6 +0.2 N.D.
stress KB with Nalidixic 12.5 ug/ml -0.1 +0.7 +0.8 +0.1 N.D.
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.4 +0.7 +0.4 +0.2 N.D.
kb KB +0.4 +0.8 +0.4 +0.2 N.D.
stress KB with Benzalkonium Chloride 6.25 ug/ml +1.1 +0.4 +0.5 -0.3 N.D.
stress KB with Gossypetin 10 mM +0.5 +0.7 +0.4 +0.1 N.D.
in planta apoplastic; Green bean; 6 days +0.3 +0.6 +0.9 +0.1 N.D.
stress KB with Novobiocin 250 ug/ml +0.3 +1.0 +0.5 +0.2 N.D.
in planta apoplastic; Green bean; 6 days +0.6 +0.5 +1.1 +0.1 N.D.
stress KB with Mitomycin C 0.625 ug/ml +0.9 +0.8 +1.2 -0.5 N.D.
remove
Psyr_1997
plot		 remove
Psyr_1998
plot		 remove
Psyr_1999		 remove
Psyr_2000
plot		 remove
Psyr_2001
plot