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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1981 and Psyr_1982 are separated by 63 nucleotides
Psyr_1982 and Psyr_1983 are separated by 145 nucleotides
Psyr_1983 and Psyr_1984 are separated by 10 nucleotides
Psyr_1984 and Psyr_1985 are separated by 155 nucleotides
Psyr_1981: Psyr_1981 - PAS:GGDEF, at 2,299,450 to 2,301,642
_1981
Psyr_1982: Psyr_1982 - transcriptional regulator, LysR family, at 2,301,706 to 2,302,578
_1982
Psyr_1983: Psyr_1983 - 3-isopropylmalate dehydratase, large subunit, at 2,302,724 to 2,304,148
_1983
Psyr_1984: Psyr_1984 - 3-isopropylmalate dehydratase, small subunit, at 2,304,159 to 2,304,800
_1984
Psyr_1985: Psyr_1985 - 3-isopropylmalate dehydrogenase, at 2,304,956 to 2,306,038
_1985
Group
Condition
Psyr
_1981
Psyr
_1982
Psyr
_1983
Psyr
_1984
Psyr
_1985
in planta
apoplastic; Lima bean
+0.0
-0.2
-4.1
-6.7
-5.3
in planta
epiphytic; Lima bean
-0.1
-0.0
-5.5
-5.5
-4.9
carbon source
D-Gluconic (C)
-0.2
-0.2
-5.2
-6.1
-4.4
carbon source
Citric Acid (C)
-0.1
-0.7
-4.8
-5.9
-4.5
in planta
epiphytic; Lima bean
-0.2
-0.1
-4.4
-6.2
-4.8
carbon source
Glycerol (C)
-0.2
-0.3
-5.5
-5.0
-4.2
in planta
apoplastic; Lima bean
+0.1
+0.0
-4.8
-5.7
-4.7
carbon source
Sucrose (C)
-0.2
-0.2
-4.4
-6.0
-4.4
carbon source
4-hydroxybutyric (C)
-0.2
-0.2
-4.5
-6.0
-3.9
in planta
apoplastic; Lima bean
+0.1
-0.2
-4.0
-5.4
-5.2
in planta
epiphytic; Lima bean
+0.2
+0.1
-4.4
-5.7
-4.8
carbon source
D-Mannose (C)
+0.1
-0.3
-4.1
-5.9
-4.3
in planta
apoplastic; Lima bean
+0.1
-0.0
-4.8
-4.8
-4.9
carbon source
Succinic Acid (C)
+0.2
-0.1
-4.7
-5.5
-4.3
carbon source
4-Aminobutyric (C)
-0.1
-0.1
-4.9
-5.3
-3.9
in planta
epiphytic; Lima bean
+0.1
+0.1
-5.1
-5.7
-3.6
in planta
apoplastic; Pepper
+0.1
+0.2
-4.4
-5.4
-4.7
in planta
apoplastic; Pepper
-0.1
+0.3
-5.5
-4.4
-4.1
carbon source
Fumaric (C)
+0.1
-0.1
-4.4
-5.0
-4.2
carbon source
L-Proline (C)
-0.0
+0.0
-4.6
-5.0
-3.8
in planta
apoplastic, sonication recovery; Green bean
-0.4
+0.0
-4.8
-4.1
-4.1
in planta
apoplastic; Pepper
-0.0
+0.1
-4.4
-4.3
-4.6
in planta
apoplastic, sonication recovery; Green bean
-0.3
-0.2
-3.9
-4.7
-4.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.6
-4.8
-5.4
-4.0
carbon source
Citric Acid (C)
-0.1
-0.1
-4.2
-4.5
-4.1
carbon source
a-Ketoglutaric (C)
+0.1
+0.0
-4.8
-4.1
-4.1
carbon source
L-Malic (C)
-0.0
-0.1
-4.6
-3.9
-4.1
in planta
apoplastic; Pepper
-0.2
-0.0
-4.3
-4.1
-3.6
in planta
apoplastic; Pepper
+0.0
-0.0
-4.3
-4.1
-3.8
in planta
apoplastic, grinding recovery; Green bean
-0.0
-0.3
-3.6
-3.5
-4.7
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