Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_1981 and Psyr_1982 are separated by 63 nucleotidesPsyr_1982 and Psyr_1983 are separated by 145 nucleotidesPsyr_1983 and Psyr_1984 are separated by 10 nucleotidesPsyr_1984 and Psyr_1985 are separated by 155 nucleotides Psyr_1981: Psyr_1981 - PAS:GGDEF, at 2,299,450 to 2,301,642 _1981 Psyr_1982: Psyr_1982 - transcriptional regulator, LysR family, at 2,301,706 to 2,302,578 _1982 Psyr_1983: Psyr_1983 - 3-isopropylmalate dehydratase, large subunit, at 2,302,724 to 2,304,148 _1983 Psyr_1984: Psyr_1984 - 3-isopropylmalate dehydratase, small subunit, at 2,304,159 to 2,304,800 _1984 Psyr_1985: Psyr_1985 - 3-isopropylmalate dehydrogenase, at 2,304,956 to 2,306,038 _1985
Group Condition Psyr_1981 Psyr_1982 Psyr_1983 Psyr_1984 Psyr_1985
in planta apoplastic; Lima bean +0.0 -0.2 -4.1 -6.7 -5.3
in planta epiphytic; Lima bean -0.1 -0.0 -5.5 -5.5 -4.9
carbon source D-Gluconic (C) -0.2 -0.2 -5.2 -6.1 -4.4
carbon source Citric Acid (C) -0.1 -0.7 -4.8 -5.9 -4.5
in planta epiphytic; Lima bean -0.2 -0.1 -4.4 -6.2 -4.8
carbon source Glycerol (C) -0.2 -0.3 -5.5 -5.0 -4.2
in planta apoplastic; Lima bean +0.1 +0.0 -4.8 -5.7 -4.7
carbon source Sucrose (C) -0.2 -0.2 -4.4 -6.0 -4.4
carbon source 4-hydroxybutyric (C) -0.2 -0.2 -4.5 -6.0 -3.9
in planta apoplastic; Lima bean +0.1 -0.2 -4.0 -5.4 -5.2
in planta epiphytic; Lima bean +0.2 +0.1 -4.4 -5.7 -4.8
carbon source D-Mannose (C) +0.1 -0.3 -4.1 -5.9 -4.3
in planta apoplastic; Lima bean +0.1 -0.0 -4.8 -4.8 -4.9
carbon source Succinic Acid (C) +0.2 -0.1 -4.7 -5.5 -4.3
carbon source 4-Aminobutyric (C) -0.1 -0.1 -4.9 -5.3 -3.9
in planta epiphytic; Lima bean +0.1 +0.1 -5.1 -5.7 -3.6
in planta apoplastic; Pepper +0.1 +0.2 -4.4 -5.4 -4.7
in planta apoplastic; Pepper -0.1 +0.3 -5.5 -4.4 -4.1
carbon source Fumaric (C) +0.1 -0.1 -4.4 -5.0 -4.2
carbon source L-Proline (C) -0.0 +0.0 -4.6 -5.0 -3.8
in planta apoplastic, sonication recovery; Green bean -0.4 +0.0 -4.8 -4.1 -4.1
in planta apoplastic; Pepper -0.0 +0.1 -4.4 -4.3 -4.6
in planta apoplastic, sonication recovery; Green bean -0.3 -0.2 -3.9 -4.7 -4.2
in planta apoplastic, chopping recovery; Green bean +0.4 +0.6 -4.8 -5.4 -4.0
carbon source Citric Acid (C) -0.1 -0.1 -4.2 -4.5 -4.1
carbon source a-Ketoglutaric (C) +0.1 +0.0 -4.8 -4.1 -4.1
carbon source L-Malic (C) -0.0 -0.1 -4.6 -3.9 -4.1
in planta apoplastic; Pepper -0.2 -0.0 -4.3 -4.1 -3.6
in planta apoplastic; Pepper +0.0 -0.0 -4.3 -4.1 -3.8
in planta apoplastic, grinding recovery; Green bean -0.0 -0.3 -3.6 -3.5 -4.7
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