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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1969 and Psyr_1970 are separated by 0 nucleotides
Psyr_1970 and Psyr_1971 are separated by 186 nucleotides
Psyr_1971 and Psyr_1972 are separated by 52 nucleotides
Psyr_1972 and Psyr_1973 are separated by 271 nucleotides
Psyr_1969: Psyr_1969 - ABC transporter:Protein of unknown function DUF214, at 2,282,501 to 2,284,474
_1969
Psyr_1970: Psyr_1970 - Secretion protein HlyD, at 2,284,475 to 2,285,647
_1970
Psyr_1971: Psyr_1971 - Peptidase S45, penicillin amidase, at 2,285,834 to 2,288,173
_1971
Psyr_1972: Psyr_1972 - conserved hypothetical protein, at 2,288,226 to 2,288,537
_1972
Psyr_1973: Psyr_1973 - Aspartate transaminase, at 2,288,809 to 2,290,005
_1973
Group
Condition
Psyr
_1969
Psyr
_1970
Psyr
_1971
Psyr
_1972
Psyr
_1973
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-1.8
-2.0
-0.0
+0.3
-0.5
carbon source
Glycerol (C)
-1.3
-1.2
-0.1
+0.4
-0.9
stress
KB with Berberine 250 ug/ml
-0.4
-0.3
-0.5
-1.0
-0.5
in planta
epiphytic; Lima bean
-0.1
-0.2
+0.0
-0.2
-1.8
carbon source
L-Proline (C)
-0.6
-0.4
-0.0
-0.2
-0.5
in planta
epiphytic; Lima bean
+0.2
-0.7
-0.2
+0.7
-1.6
carbon source
Citric Acid (C)
-0.5
-1.0
-0.0
+0.5
-0.7
carbon source
Sucrose (C)
-0.4
-1.2
-0.2
+0.4
-0.2
carbon source
a-Ketoglutaric (C)
-0.2
-0.7
+0.2
-0.1
-0.7
carbon source
4-hydroxybutyric (C)
-0.7
-1.1
-0.2
+0.4
+0.1
carbon source
Citric Acid (C)
-0.4
-1.0
-0.3
+0.2
+0.1
in planta
apoplastic; Green bean; 13 days
+0.4
+0.7
+0.7
-0.8
-2.2
carbon source
4-Aminobutyric (C)
-1.0
-0.3
-0.1
+0.5
-0.2
in planta
epiphytic; Green bean
+0.5
-0.2
+0.2
-0.4
-1.0
aphid
library passed through aphids in food, 72 hours
-1.3
+0.5
-0.6
+0.1
+0.4
in planta
apoplastic, sonication recovery; Green bean
+0.1
+0.2
+0.7
+0.2
-2.1
stress
KB with Fusaric 250 ug/ml
-0.8
-0.4
+0.2
+0.1
+0.1
carbon source
D-Gluconic (C)
-0.5
-0.9
-0.2
+1.0
+0.0
in planta
apoplastic, grinding recovery; Green bean
+0.4
+0.1
+0.1
+0.3
-1.3
carbon source
Fumaric (C)
-0.6
-1.1
+0.0
+0.8
+0.5
in planta
apoplastic, sonication recovery; Green bean
+0.1
+0.6
+0.6
-0.2
-1.2
aphid
library passed through aphids in food, 24 hours
-0.3
+0.4
-0.1
+0.4
-0.5
in planta
epiphytic; Green bean
+0.6
-0.2
+0.3
-0.7
+0.0
carbon source
Succinic Acid (C)
-0.4
-0.7
-0.1
+0.9
+0.6
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.5
-0.3
+0.2
+0.4
+0.9
in planta
Green bean; epiphytic
-0.1
+0.2
+0.0
+1.2
-0.4
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.4
+0.2
+0.2
+0.5
+0.5
stress
KB with Mitomycin C 0.625 ug/ml
+0.4
-0.5
+0.2
+0.9
+0.1
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.4
+0.7
+0.1
+0.7
+0.3
stress
KB with Isovanillin 10 mM
+0.2
-0.2
+0.3
+0.4
+1.1
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