Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_1956 and Psyr_1957 are separated by 518 nucleotides
Psyr_1957 and Psyr_1958 overlap by 4 nucleotides
Psyr_1958 and Psyr_1959 are separated by 14 nucleotides
Psyr_1959 and Psyr_1960 overlap by 20 nucleotides
Psyr_1956: Psyr_1956 - pyoverdine biosynthesis regulatory gene, putative, at 2,239,889 to 2,240,866
_1956
Psyr_1957: Psyr_1957 - Amino acid adenylation, at 2,241,385 to 2,244,795
_1957
Psyr_1958: Psyr_1958 - Non-ribosomal peptide synthase:Amino acid adenylation, at 2,244,792 to 2,252,792
_1958
Psyr_1959: Psyr_1959 - Amino acid adenylation, at 2,252,807 to 2,259,271
_1959
Psyr_1960: Psyr_1960 - Non-ribosomal peptide synthase:Amino acid adenylation, at 2,259,252 to 2,267,903
_1960
Group
Condition
Psyr
_1956
Psyr
_1957
Psyr
_1958
Psyr
_1959
Psyr
_1960
stress
KB with Acriflavine 7.75 ug/ml
-0.8
-0.3
-0.4
-0.4
-0.2
carbon source
Glycerol (C)
-0.3
-0.8
-0.4
-0.3
-0.3
carbon source
4-hydroxybutyric (C)
-0.2
-0.4
-0.4
-0.5
-0.4
stress
KB with Berberine 250 ug/ml
-0.3
-0.3
-0.3
-0.3
-0.4
carbon source
4-Aminobutyric (C)
+0.0
-0.3
-0.3
-0.4
-0.2
in planta
apoplastic, sonication recovery; Green bean
-0.2
-0.5
+0.1
-0.6
+0.1
in planta
apoplastic, sonication recovery; Green bean
-0.2
-0.5
+0.2
-0.5
-0.1
carbon source
D-Mannose (C)
+0.1
-0.6
-0.1
-0.1
-0.2
carbon source
Citric Acid (C)
+0.2
-0.3
-0.3
-0.2
-0.2
stress
KB with Oxymatrine 10 mM
-0.3
-0.2
+0.3
-0.1
-0.0
in planta
apoplastic; Pepper
-0.7
-0.2
+0.3
+0.1
+0.2
in planta
apoplastic; Pepper
+0.3
-0.5
-0.0
-0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.3
-0.2
+0.1
-0.5
+0.1
in planta
apoplastic; Pepper
-0.8
+0.0
+0.3
+0.2
+0.2
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.4
-0.1
+0.2
+0.1
+0.2
stress
KB with Brucine 10 mM
-0.3
-0.2
+0.2
+0.1
+0.2
aphid
library passed through aphids in food, 72 hours
-0.5
+0.4
+0.4
-0.2
+0.1
in planta
apoplastic, grinding recovery; Green bean
+0.5
-0.2
-0.1
+0.1
+0.2
in planta
apoplastic; Green bean; 13 days
+0.7
+0.1
-0.1
-0.4
+0.2
aphid
library passed through aphids in food, 72 hours
+0.5
+0.1
+0.2
+0.1
-0.0
in planta
apoplastic, grinding recovery; Green bean
+0.4
+0.0
+0.1
+0.3
+0.1
aphid
library passed through aphids in food, 72 hours
+0.5
-0.0
+0.2
+0.4
+0.1
stress
KB with Curcumin 10 mM
+0.2
+0.4
+0.2
+0.1
+0.3
stress
KB with Nalidixic 12.5 ug/ml
+0.3
+0.2
+0.2
+0.1
+0.5
stress
KB with Acridine orange 62.5 ug/ml
-0.1
+0.5
+0.0
+0.1
+0.7
stress
KB with Mitomycin C 0.625 ug/ml
+0.3
+0.8
+0.2
-0.3
+0.6
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+0.1
+0.3
+0.5
+0.5
+0.5
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.3
+0.7
+0.1
+0.2
+0.8
stress
KB with Plumbagin 10 mM
+0.2
+0.5
+0.5
+0.4
+0.7
stress
KB with Fusaric 250 ug/ml
+0.4
+0.6
+0.6
+0.4
+0.5
remove
Psyr_1956
plot
remove
Psyr_1957
plot
remove
Psyr_1958
remove
Psyr_1959
plot
remove
Psyr_1960
plot