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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1760 and Psyr_1761 are separated by 99 nucleotides
Psyr_1761 and Psyr_1762 are separated by 81 nucleotides
Psyr_1762 and Psyr_1763 are separated by 46 nucleotides
Psyr_1763 and Psyr_1764 are separated by 65 nucleotides
Psyr_1760: Psyr_1760 - Peptidoglycan-binding LysM:SLT:MLTD_N, at 2,001,324 to 2,002,928
_1760
Psyr_1761: Psyr_1761 - Hydroxyacylglutathione hydrolase, at 2,003,028 to 2,003,807
_1761
Psyr_1762: Psyr_1762 - conserved hypothetical protein, at 2,003,889 to 2,004,650
_1762
Psyr_1763: Psyr_1763 - RNase HI, at 2,004,697 to 2,005,149
_1763
Psyr_1764: Psyr_1764 - DNA polymerase III, epsilon subunit, at 2,005,215 to 2,005,994
_1764
Group
Condition
Psyr
_1760
Psyr
_1761
Psyr
_1762
Psyr
_1763
Psyr
_1764
stress
MBOA 0.5 mM
-0.0
+0.0
-2.4
N.D.
N.D.
stress
DMSO
+0.0
-0.2
-2.0
N.D.
N.D.
stress
DMSO
+0.0
-0.2
-2.0
N.D.
N.D.
no stress control
no stress control
-0.0
-0.2
-1.9
N.D.
N.D.
no stress control
no stress control
-0.2
+0.1
-1.9
N.D.
N.D.
stress
MBOA 1.2 mM
-0.0
+0.1
-2.0
N.D.
N.D.
no stress control
no stress control
-0.1
+0.2
-2.0
N.D.
N.D.
stress
MBOA 2.5 mM
+0.1
+0.1
-2.0
N.D.
N.D.
stress
MBOA 2.5 mM
-0.2
+0.2
-1.8
N.D.
N.D.
stress
MBOA 0.5 mM
-0.0
+0.1
-1.8
N.D.
N.D.
stress
MBOA 1.2 mM
-0.0
+0.5
-2.2
N.D.
N.D.
stress
MBOA 1.2 mM
-0.0
+0.1
-1.8
N.D.
N.D.
no stress control
no stress control
-0.1
+0.0
-1.6
N.D.
N.D.
stress
MBOA 2.5 mM
-0.0
-0.1
-1.5
N.D.
N.D.
stress
MBOA 0.5 mM
+0.1
+0.2
-1.9
N.D.
N.D.
stress
MBOA 1.2 mM
-0.1
+0.3
-1.7
N.D.
N.D.
stress
MBOA 0.5 mM
-0.0
+0.5
-2.0
N.D.
N.D.
stress
DMSO
-0.2
-0.0
-1.3
N.D.
N.D.
stress
KB with Berberine 250 ug/ml
+0.0
-0.1
-1.1
N.D.
N.D.
carbon source
L-Malic (C)
-0.2
+0.3
-0.9
N.D.
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
+1.6
-1.9
N.D.
N.D.
carbon source
4-hydroxybutyric (C)
+0.3
+0.1
-1.0
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
+0.2
+0.4
-0.8
N.D.
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.1
+0.6
-0.6
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-0.1
+0.8
-0.5
N.D.
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.7
-0.4
N.D.
N.D.
stress
KB with Acridine orange 62.5 ug/ml
-0.3
+0.9
-0.1
N.D.
N.D.
stress
KB with Plumbagin 10 mM
+0.5
+0.6
+0.2
N.D.
N.D.
carbon source
Citric Acid (C)
+0.2
+0.6
+0.5
N.D.
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.0
+1.0
+0.7
N.D.
N.D.
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