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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1695 and Psyr_1696 are separated by 13 nucleotides
Psyr_1696 and Psyr_1697 are separated by 27 nucleotides
Psyr_1697 and Psyr_1698 are separated by 11 nucleotides
Psyr_1698 and Psyr_1699 are separated by 516 nucleotides
Psyr_1695: Psyr_1695 - conserved hypothetical protein, at 1,902,902 to 1,903,567
_1695
Psyr_1696: Psyr_1696 - Protein of unknown function DUF350, at 1,903,581 to 1,904,006
_1696
Psyr_1697: Psyr_1697 - conserved hypothetical protein, at 1,904,034 to 1,904,780
_1697
Psyr_1698: Psyr_1698 - Glutathionylspermidine synthase, at 1,904,792 to 1,905,949
_1698
Psyr_1699: Psyr_1699 - Protein of unknown function DUF1329, at 1,906,466 to 1,907,821
_1699
Group
Condition
Psyr
_1695
Psyr
_1696
Psyr
_1697
Psyr
_1698
Psyr
_1699
stress
KB with Mitomycin C 0.625 ug/ml
-0.3
+0.3
-0.4
-1.0
-0.2
stress
KB with Gambogic Acid 10 mM
-0.9
-0.2
+0.2
-0.1
-0.2
stress
KB with Methanol 5 vol%
-0.6
-0.1
-0.2
-0.2
-0.2
stress
KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
-0.5
+0.1
-0.1
-0.6
+0.0
in planta
epiphytic; Lima bean
-0.7
+0.2
+0.1
-0.5
-0.0
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.5
-0.1
+0.1
-0.5
+0.1
in planta
apoplastic; Lima bean
-0.7
+0.1
-0.1
-0.1
+0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
+0.5
-0.3
-0.6
-0.1
aphid
library passed through aphids in food, 72 hours
+0.5
-0.1
+0.2
-1.4
+0.1
in planta
apoplastic, grinding recovery; Green bean
-0.6
-0.1
+0.2
-0.3
+0.3
stress
KB with Quinine Hdrochloride 10 mM
-0.1
-0.2
+0.2
-0.3
-0.2
stress
KB with Rotenone 0.125 mg/ml
-0.3
+0.1
-0.3
-0.2
+0.2
in planta
apoplastic; Lima bean
+0.2
+0.1
-0.5
-0.3
+0.1
stress
KB with Khayasin C 10 mM
-0.7
+0.0
+0.2
+0.1
+0.1
in planta
apoplastic, sonication recovery; Green bean
+0.2
-0.2
+0.2
-0.4
-0.0
in planta
apoplastic, sonication recovery; Green bean
+0.2
-0.1
+0.2
-0.5
+0.0
stress
KB with Acridine orange 62.5 ug/ml
-0.4
+0.8
-0.2
-0.2
-0.0
stress
KB with Ginkgolide A 10 mM
+0.4
-0.1
-0.3
+0.2
+0.0
in planta
apoplastic, grinding recovery; Green bean
-0.3
+0.1
+0.4
-0.2
+0.2
carbon source
L-Proline (C)
-0.3
+0.1
-0.1
+0.5
-0.1
stress
KB with Avocatin A 10 mM
+0.6
-0.2
-0.1
-0.2
+0.1
in planta
apoplastic; Lima bean
-0.2
+0.1
+0.2
+0.4
-0.1
carbon source
D-Mannose (C)
-0.2
+0.0
+0.0
+0.6
-0.1
aphid
library passed through aphids in food, 72 hours
-0.3
+0.3
-0.0
+0.3
+0.2
carbon source
Citric Acid (C)
-0.1
-0.1
+0.1
+0.6
-0.0
in planta
Green bean; epiphytic
+0.2
-0.0
-0.1
+0.6
-0.1
carbon source
Fumaric (C)
-0.0
+0.2
+0.3
+0.4
-0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.5
+0.3
+0.1
-0.3
+0.1
carbon source
Succinic Acid (C)
+0.2
+0.1
-0.1
+0.6
+0.0
in planta
apoplastic; Green bean; 13 days
-0.1
+0.6
+0.4
+0.5
+0.1
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