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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1651 and Psyr_1652 are separated by 19 nucleotides
Psyr_1652 and Psyr_1653 overlap by 8 nucleotides
Psyr_1653 and Psyr_1654 are separated by 34 nucleotides
Psyr_1654 and Psyr_1655 are separated by 14 nucleotides
Psyr_1651: Psyr_1651 - Protein of unknown function DUF175, at 1,855,885 to 1,857,000
_1651
Psyr_1652: Psyr_1652 - thymidylate kinase, at 1,857,020 to 1,857,652
_1652
Psyr_1653: Psyr_1653 - DNA polymerase III, delta prime subunit, at 1,857,645 to 1,858,631
_1653
Psyr_1654: Psyr_1654 - Type IV pilus assembly PilZ, at 1,858,666 to 1,859,022
_1654
Psyr_1655: Psyr_1655 - TatD-related deoxyribonuclease, at 1,859,037 to 1,859,822
_1655
Group
Condition
Psyr
_1651
Psyr
_1652
Psyr
_1653
Psyr
_1654
Psyr
_1655
aphid
library passed through aphids in food, 72 hours
-0.7
N.D.
N.D.
+0.1
-0.8
aphid
library passed through aphids in food, 72 hours
-1.0
N.D.
N.D.
-0.1
-0.2
carbon source
L-Malic (C)
-1.4
N.D.
N.D.
+0.0
+0.0
stress
KB with Solanesol 10 mM
-0.6
N.D.
N.D.
-0.3
-0.3
carbon source
Fumaric (C)
-0.4
N.D.
N.D.
-0.1
-0.4
stress
KB with Isoliquiritigenin 10 mM
-0.4
N.D.
N.D.
-0.5
+0.0
stress
KB with Curcumin 10 mM
-0.6
N.D.
N.D.
-0.2
-0.1
stress
KB with Chaulmoogric 10 mM
-0.5
N.D.
N.D.
-0.3
+0.0
aphid
library passed through aphids in food, 72 hours
-1.0
N.D.
N.D.
+0.0
+0.2
stress
KB with Diallyl sulfide 10 mM
-0.5
N.D.
N.D.
-0.3
+0.1
in planta
apoplastic, grinding recovery; Green bean
-0.6
N.D.
N.D.
+0.2
-0.3
in planta
Green bean; epiphytic
-0.9
N.D.
N.D.
+0.2
+0.1
in planta
apoplastic; Lima bean
-0.9
N.D.
N.D.
+0.4
+0.0
carbon source
Succinic Acid (C)
-0.3
N.D.
N.D.
+0.2
-0.3
in planta
apoplastic; Lima bean
-0.8
N.D.
N.D.
+0.4
-0.0
carbon source
4-hydroxybutyric (C)
+0.2
N.D.
N.D.
+0.1
-0.6
stress
KB with Mitomycin C 0.625 ug/ml
-0.6
N.D.
N.D.
+0.0
+0.3
in planta
apoplastic; Green bean; 13 days
-0.5
N.D.
N.D.
+0.4
-0.2
stress
KB with Fusaric 250 ug/ml
+0.4
N.D.
N.D.
-0.2
-0.4
in planta
epiphytic; Green bean
-0.5
N.D.
N.D.
+0.2
+0.2
in planta
Green bean; epiphytic
-0.5
N.D.
N.D.
+0.4
+0.0
stress
KB with Acridine orange 62.5 ug/ml
-0.6
N.D.
N.D.
+0.2
+0.4
in planta
epiphytic; Green bean
+0.5
N.D.
N.D.
+0.2
-0.5
in planta
epiphytic; Green bean
+0.5
N.D.
N.D.
+0.3
-0.5
stress
MBOA 0.5 mM
+0.6
N.D.
N.D.
+0.0
-0.3
in planta
epiphytic; Green bean
+0.3
N.D.
N.D.
+0.3
-0.2
carbon source
Sucrose (C)
+0.7
N.D.
N.D.
+0.0
-0.2
in planta
epiphytic; Lima bean
-0.1
N.D.
N.D.
+0.7
+0.2
stress
KB with Plumbagin 10 mM
+0.9
N.D.
N.D.
-0.1
+0.0
stress
KB with Erythromycin 25 ug/ml
+0.2
N.D.
N.D.
+0.6
+0.2
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