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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1620 and Psyr_1621 are separated by 219 nucleotides
Psyr_1621 and Psyr_1622 are separated by 1 nucleotides
Psyr_1622 and Psyr_1623 are separated by 287 nucleotides
Psyr_1623 and Psyr_1624 are separated by 2 nucleotides
Psyr_1620: Psyr_1620 - conserved hypothetical protein, at 1,821,315 to 1,822,511
_1620
Psyr_1621: Psyr_1621 - Autoinducer synthesis protein, at 1,822,731 to 1,823,411
_1621
Psyr_1622: Psyr_1622 - regulatory protein, LuxR:Autoinducer-binding protein, at 1,823,413 to 1,824,156
_1622
Psyr_1623: Psyr_1623 - Pyruvate dehydrogenase (lipoamide), at 1,824,444 to 1,825,547
_1623
Psyr_1624: Psyr_1624 - transcriptional regulator, MarR family, at 1,825,550 to 1,826,002
_1624
Group
Condition
Psyr
_1620
Psyr
_1621
Psyr
_1622
Psyr
_1623
Psyr
_1624
in planta
apoplastic; Green bean; 13 days
-0.4
-2.1
+0.5
+0.4
-0.3
stress
KB with Berberine 250 ug/ml
-0.5
-0.3
-0.3
-0.3
-0.3
carbon source
4-hydroxybutyric (C)
+0.2
-0.6
-0.0
-0.1
-1.0
in planta
apoplastic; Green bean; 6 days
+0.2
-0.6
-0.2
-0.3
-0.4
stress
KB with Emodin 10 mM
+0.1
-0.5
-0.2
-0.0
-0.4
carbon source
Citric Acid (C)
+0.1
-0.3
-0.0
+0.2
-0.9
carbon source
D-Mannose (C)
+0.4
-0.5
-0.1
-0.0
-0.6
carbon source
L-Proline (C)
+0.3
-0.5
+0.1
-0.1
-0.7
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.3
-0.6
+0.1
-0.7
carbon source
Succinic Acid (C)
+0.2
-0.3
-0.2
-0.2
-0.3
carbon source
Fumaric (C)
+0.3
-0.6
-0.0
-0.0
-0.3
stress
KB with Nalidixic 12.5 ug/ml
-0.4
+0.5
-0.6
-0.0
-0.0
stress
KB with Phloretin 250 ug/ml
-0.2
+0.3
-0.3
+0.1
-0.6
stress
KB with Mitomycin C 0.625 ug/ml
-0.3
+0.2
-0.4
+0.4
-0.5
carbon source
Glycerol (C)
+0.4
+0.2
-0.3
-0.2
-0.6
stress
KB with Trimethoprim 125 ug/ml
-0.2
+0.5
-0.3
+0.1
-0.4
aphid
library passed through aphids in food, 72 hours
-0.1
+0.4
+0.2
-0.2
-0.6
stress
KB with Dimethyl Sulfoxide 1 vol%
-0.1
+0.6
-0.4
-0.0
-0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
+0.6
-0.2
+0.3
-0.9
in planta
apoplastic; Pepper
+0.4
-0.3
-0.4
-0.2
+0.5
in planta
epiphytic; Green bean
+0.2
-0.5
-0.2
-0.0
+0.6
in planta
apoplastic, chopping recovery; Green bean
+0.3
-0.9
+0.3
+0.1
+0.5
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.3
+0.6
-0.2
+0.1
+0.2
stress
KB with Oxonitine 10 mM
+0.1
-0.3
-0.2
+0.1
+0.7
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
+0.2
-0.4
+0.0
+0.6
stress
KB with Mexicanolide 10 mM
+0.0
-0.0
-0.2
+0.2
+0.7
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.3
-0.1
-0.3
+0.7
stress
KB with Fusaric 250 ug/ml
+0.1
+0.5
-0.4
+0.3
+0.3
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.1
+0.0
-0.2
+0.7
in planta
Green bean; epiphytic
-0.1
+0.7
-0.0
+0.2
+0.3
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