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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1552 and Psyr_1553 are separated by 602 nucleotides
Psyr_1553 and Psyr_1554 are separated by 424 nucleotides
Psyr_1554 and Psyr_1555 are separated by 937 nucleotides
Psyr_1555 and Psyr_1556 are separated by 373 nucleotides
Psyr_1552: Psyr_1552 - CDS, at 1,745,098 to 1,745,496
_1552
Psyr_1553: Psyr_1553 - hypothetical protein, at 1,746,099 to 1,746,434
_1553
Psyr_1554: Psyr_1554 - hypothetical protein, at 1,746,859 to 1,747,890
_1554
Psyr_1555: Psyr_1555 - Cobyrinic acid a,c-diamide synthase, at 1,748,828 to 1,749,769
_1555
Psyr_1556: Psyr_1556 - hypothetical protein, at 1,750,143 to 1,750,403
_1556
Group
Condition
Psyr
_1552
Psyr
_1553
Psyr
_1554
Psyr
_1555
Psyr
_1556
stress
KB with Leucodin 10 mM
-0.2
-0.8
-0.5
-1.5
-3.5
stress
KB with Trimethoprim 125 ug/ml
-0.0
-0.4
-0.3
-2.0
-3.4
stress
KB with Nalidixic 12.5 ug/ml
+0.2
-0.4
-0.7
-1.5
-3.5
stress
KB with Veratric Acid 10 mM
+0.1
-0.5
-0.3
-1.6
-2.8
stress
KB with Acacetin 10 mM
-0.1
-0.2
+0.0
-1.1
-3.8
stress
KB with Novobiocin 250 ug/ml
+0.1
-1.1
-0.2
-1.3
-2.7
stress
KB with Quercetin 360 ug/ml
+0.0
-0.3
-0.3
-1.5
-3.0
stress
KB with Brucine 10 mM
-0.0
-0.5
-0.0
-1.4
-3.1
stress
KB with Fusaric 250 ug/ml
-0.1
-0.8
-0.5
-1.1
-2.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-0.8
+0.1
-1.3
-2.9
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
+0.2
-0.5
-0.0
-0.5
-3.9
stress
KB with Fumarprotocetraric Acid 10 mM
+0.0
-0.2
-0.0
-1.2
-3.4
stress
KB with Cimicifugoside H1 10 mM
+0.1
-0.6
-0.1
-0.5
-3.6
stress
KB with Methanol 5 vol%
+0.2
-0.4
-0.4
-1.2
-2.8
stress
KB with Quinine Hdrochloride 10 mM
-0.2
-0.1
-0.1
-1.5
-2.6
stress
KB with Xanthyletin 10 mM
+0.0
-0.7
-0.1
-1.2
-2.5
stress
KB with Isosafrole 10 mM
+0.1
-0.3
-0.2
-0.6
-3.5
stress
KB with Sinomenine 10 mM
-0.0
-0.6
-0.1
-1.1
-2.6
stress
KB with Karanjin 10 mM
-0.0
-0.4
+0.1
-1.3
-2.8
stress
KB with Pterin-6-Carboxylic Acid 10 mM
-0.1
-0.5
-0.1
-1.5
-2.2
stress
KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
-0.0
-0.5
-0.4
-1.0
-2.3
stress
KB with Sparassol 10 mM
+0.0
-0.6
+0.0
-1.5
-2.2
stress
KB with Chrysin 10 mM
-0.0
-0.3
-0.2
-1.1
-2.7
stress
KB with Arecoline Hydrobromide 10 mM
+0.0
-0.3
-0.2
-1.3
-2.5
stress
KB with Fusaric 250 ug/ml
+0.0
+0.1
-0.6
-2.0
-1.7
stress
KB with Carbenicillin 250 ug/ml
+0.4
-0.1
-0.3
-1.6
-2.7
stress
KB with Khayasin C 10 mM
+0.0
-0.4
-0.2
-1.0
-2.6
stress
KB with Anabasine Hydrochloride 10 mM
+0.1
-0.5
-0.2
-0.9
-2.6
stress
KB with Strychnine Sulfate 10 mM
+0.1
-0.4
-0.0
-1.0
-2.6
stress
KB with Dihydrodehydroerosone 10 mM
+0.2
-0.3
-0.1
-1.3
-2.3
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