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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1549 and Psyr_1550 are separated by 0 nucleotides
Psyr_1550 and Psyr_1551 are separated by 28 nucleotides
Psyr_1551 and Psyr_RNA25 are separated by 92 nucleotides
Psyr_RNA25 and Psyr_1552 are separated by 58 nucleotides
Psyr_1549: Psyr_1549 - lipoprotein, putative, at 1,742,241 to 1,743,359
_1549
Psyr_1550: Psyr_1550 - Beta-lactamase-like protein, at 1,743,360 to 1,744,118
_1550
Psyr_1551: Psyr_1551 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 1,744,147 to 1,744,857
_1551
Psyr_RNA25: Psyr_RNA25 - tRNA-Ser, at 1,744,950 to 1,745,039
_RNA25
Psyr_1552: Psyr_1552 - CDS, at 1,745,098 to 1,745,496
_1552
Group
Condition
Psyr
_1549
Psyr
_1550
Psyr
_1551
Psyr
_RNA25
Psyr
_1552
carbon source
L-Proline (C)
-0.3
-0.5
N.D.
N.D.
-0.2
aphid
library passed through aphids in food, 72 hours
-0.6
-0.1
N.D.
N.D.
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.6
N.D.
N.D.
-0.0
in planta
Green bean; epiphytic
-0.8
-0.4
N.D.
N.D.
+0.3
in planta
Green bean; epiphytic
-0.4
-0.3
N.D.
N.D.
-0.1
in planta
apoplastic; Green bean; 6 days
-0.8
-0.0
N.D.
N.D.
+0.0
in planta
apoplastic; Green bean; 6 days
-0.7
+0.0
N.D.
N.D.
-0.1
stress
KB with Avocatin B 10 mM
-0.6
+0.0
N.D.
N.D.
-0.2
stress
KB with Totarol 10 mM
-0.3
-0.3
N.D.
N.D.
-0.2
carbon source
Citric Acid (C)
-0.9
+0.1
N.D.
N.D.
+0.1
in planta
epiphytic; Green bean
-0.6
+0.2
N.D.
N.D.
-0.2
carbon source
4-hydroxybutyric (C)
-0.4
-0.3
N.D.
N.D.
+0.1
stress
KB with Veratrine 10 mM
-0.7
+0.4
N.D.
N.D.
-0.2
aphid
library passed through aphids in food, 72 hours
-0.6
-0.0
N.D.
N.D.
+0.1
carbon source
Succinic Acid (C)
-0.4
-0.2
N.D.
N.D.
+0.3
in planta
apoplastic; Lima bean
-0.2
-0.5
N.D.
N.D.
+0.4
carbon source
L-Malic (C)
-0.7
+0.2
N.D.
N.D.
+0.3
stress
KB with Nonanoic 10 mM
-0.4
+0.4
N.D.
N.D.
-0.2
in planta
epiphytic; Green bean
-0.6
+0.3
N.D.
N.D.
+0.1
in planta
epiphytic; Green bean
-0.6
+0.3
N.D.
N.D.
+0.2
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.5
+0.3
N.D.
N.D.
+0.0
stress
KB with Prenyletin 10 mM
-0.5
+0.3
N.D.
N.D.
+0.2
stress
KB with Rifampicin 0.1 mg/ml
-0.4
+0.4
N.D.
N.D.
-0.0
in planta
apoplastic; Pepper
-0.1
+0.2
N.D.
N.D.
+0.5
stress
KB with Carbenicillin 250 ug/ml
+0.3
-0.1
N.D.
N.D.
+0.4
stress
KB with Acriflavine 7.75 ug/ml
+0.4
+0.2
N.D.
N.D.
+0.3
stress
KB with Fusaric 250 ug/ml
+0.5
+0.4
N.D.
N.D.
+0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.2
+0.3
N.D.
N.D.
+0.5
in planta
apoplastic; Pepper
+0.2
+0.3
N.D.
N.D.
+0.5
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.1
+0.5
N.D.
N.D.
+0.4
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