Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_1369 and Psyr_1370 overlap by 4 nucleotidesPsyr_1370 and Psyr_1371 overlap by 13 nucleotidesPsyr_1371 and Psyr_1372 overlap by 1 nucleotidesPsyr_1372 and Psyr_1373 are separated by 208 nucleotides Psyr_1369: Psyr_1369 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 1,552,580 to 1,553,053 _1369 Psyr_1370: Psyr_1370 - tRNA pseudouridine synthase D, TruD, at 1,553,050 to 1,554,108 _1370 Psyr_1371: Psyr_1371 - 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase, at 1,554,096 to 1,554,845 _1371 Psyr_1372: Psyr_1372 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 1,554,845 to 1,555,522 _1372 Psyr_1373: Psyr_1373 - Peptidoglycan-binding LysM:Peptidase M23B, at 1,555,731 to 1,556,597 _1373
Group Condition Psyr_1369 Psyr_1370 Psyr_1371 Psyr_1372 Psyr_1373
stress KB with Conessine 10 mM N.D. -0.2 -1.2 -0.3 -4.6
stress KB with Plumbagin 10 mM N.D. -0.2 -1.0 -1.5 -3.5
aphid library passed through aphids in food, 72 hours N.D. -0.0 -0.6 -2.3 -3.0
stress KB with Palmatine chloride 10 mM N.D. +0.1 -1.5 -0.6 -3.8
stress KB with Isoliquiritigenin 10 mM N.D. -0.2 -1.3 -0.6 -3.7
stress KB with Levodopa 10 mM N.D. -0.0 -1.3 -0.9 -3.5
stress KB with Avocatin B 10 mM N.D. +0.0 -1.5 -0.9 -3.2
stress KB with Avocadyne 10 mM N.D. +0.1 -1.7 -0.9 -2.8
stress KB with Nitrofurantoin 0.25 mg/ml N.D. -0.1 -1.8 -0.9 -2.4
stress KB with Avocatin A 10 mM N.D. +0.0 -1.6 -0.5 -3.0
carbon source L-Malic (C) N.D. -0.1 -0.8 -1.8 -2.3
stress KB with Ferulic Acid 180 ug/ml N.D. +0.3 -3.1 -0.9 -1.2
stress KB with Harmalol 10 mM N.D. -0.1 -2.2 -0.5 -1.9
stress KB with Dimethyl Sulfoxide 1.25 vol% N.D. +0.1 -1.3 -0.8 -2.9
stress KB with Dimethyl Sulfoxide 1.25 vol% N.D. -0.5 -1.1 -0.8 -2.3
in planta epiphytic; Green bean N.D. -0.5 -0.5 -0.6 -3.0
in planta apoplastic; Lima bean N.D. -0.5 -0.1 -1.2 -2.9
in planta apoplastic; Lima bean N.D. -0.5 -0.2 -1.1 -2.8
in planta apoplastic; Pepper N.D. -0.2 -0.4 -0.9 -3.1
stress KB with Chrysophanol 10 mM N.D. +0.1 -0.8 -0.5 -3.3
stress KB with Harmol 10 mM N.D. +0.0 -2.4 -1.5 -0.7
stress KB with Mitomycin C 0.625 ug/ml N.D. +0.2 -0.5 -1.5 -2.6
in planta epiphytic; Lima bean N.D. +0.1 -0.3 -0.8 -3.3
in planta apoplastic; Lima bean N.D. +0.3 -0.4 -0.4 -3.7
stress KB with Trimethoprim 125 ug/ml N.D. +0.3 -2.7 -0.1 -1.5
in planta epiphytic; Lima bean N.D. +0.3 -0.3 -0.6 -3.4
stress KB with Gossypol-Acetic Acid Complex 10 mM N.D. +0.3 -0.8 -0.5 -2.8
stress KB with Nalidixic 12.5 ug/ml N.D. +0.3 -0.9 -2.0 -1.3
stress KB with Carbenicillin 250 ug/ml N.D. +0.4 -1.3 -0.6 -2.1
carbon source D-Gluconic (C) N.D. +0.4 +1.7 +1.6 +2.1
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