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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1365 and Psyr_1366 are separated by 7 nucleotides
Psyr_1366 and Psyr_1367 are separated by 104 nucleotides
Psyr_1367 and Psyr_1368 are separated by 96 nucleotides
Psyr_1368 and Psyr_1369 are separated by 53 nucleotides
Psyr_1365: Psyr_1365 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,548,753 to 1,549,463
_1365
Psyr_1366: Psyr_1366 - transcriptional regulator, LysR family, at 1,549,471 to 1,550,367
_1366
Psyr_1367: Psyr_1367 - Zinc-containing alcohol dehydrogenase superfamily, at 1,550,472 to 1,551,584
_1367
Psyr_1368: Psyr_1368 - Carboxylesterase, at 1,551,681 to 1,552,526
_1368
Psyr_1369: Psyr_1369 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 1,552,580 to 1,553,053
_1369
Group
Condition
Psyr
_1365
Psyr
_1366
Psyr
_1367
Psyr
_1368
Psyr
_1369
stress
KB with Nonanoic 10 mM
N.D.
-0.2
-0.0
-0.6
N.D.
carbon source
L-Malic (C)
N.D.
-0.5
+0.1
-0.2
N.D.
stress
KB with Conessine 10 mM
N.D.
-0.2
+0.1
-0.4
N.D.
stress
KB with 4-hydroxychalcone 10 mM
N.D.
+0.0
+0.1
-0.6
N.D.
stress
KB with dihydrojasmonic, methyl ester 10 mM
N.D.
+0.1
-0.2
-0.4
N.D.
kb
KB
N.D.
+0.2
+0.1
-0.6
N.D.
stress
KB with Chaulmoogric 10 mM
N.D.
-0.1
+0.3
-0.5
N.D.
stress
KB with Plumbagin 10 mM
N.D.
+0.1
+0.4
-0.8
N.D.
in planta
apoplastic; Green bean; 13 days
N.D.
-0.2
+0.5
-0.5
N.D.
stress
KB with Helenine 10 mM
N.D.
+0.3
+0.2
-0.5
N.D.
in planta
apoplastic; Pepper
N.D.
+0.4
-0.5
+0.0
N.D.
stress
KB with Gossypetin 10 mM
N.D.
+0.1
+0.3
-0.4
N.D.
in planta
apoplastic, grinding recovery; Green bean
N.D.
+0.0
-0.4
+0.4
N.D.
stress
KB with Ferulic Acid 180 ug/ml
N.D.
+0.0
-0.3
+0.4
N.D.
stress
KB with L-alliin 10 mM
N.D.
+0.1
+0.3
-0.2
N.D.
in planta
epiphytic; Lima bean
N.D.
+0.3
+0.3
-0.2
N.D.
stress
KB with Nalidixic 12.5 ug/ml
N.D.
+0.0
-0.2
+0.5
N.D.
in planta
epiphytic; Lima bean
N.D.
+0.2
+0.4
-0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
+0.5
+0.3
-0.2
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
N.D.
+0.3
+0.2
+0.2
N.D.
in planta
apoplastic; Lima bean
N.D.
+0.1
+0.3
+0.3
N.D.
in planta
apoplastic; Lima bean
N.D.
+0.3
+0.3
+0.1
N.D.
stress
KB with Matrine 10 mM
N.D.
+0.3
+0.1
+0.2
N.D.
stress
KB with Quinine Hdrochloride 10 mM
N.D.
+0.1
+0.2
+0.4
N.D.
stress
KB with Ampicillin 15.6 ug/ml
N.D.
+0.2
+0.2
+0.3
N.D.
stress
KB with Usnic Acid 10 mM
N.D.
+0.3
+0.2
+0.3
N.D.
in planta
apoplastic, grinding recovery; Green bean
N.D.
+0.0
+0.1
+0.6
N.D.
stress
KB with Khayasin C 10 mM
N.D.
+0.2
+0.2
+0.4
N.D.
stress
KB with Novobiocin 250 ug/ml
N.D.
+0.5
+0.0
+0.5
N.D.
aphid
library passed through aphids in food, 72 hours
N.D.
+1.0
+0.1
+0.3
N.D.
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