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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1302 and Psyr_1303 are separated by 297 nucleotides
Psyr_1303 and Psyr_1304 are separated by 7 nucleotides
Psyr_1304 and Psyr_1305 overlap by 4 nucleotides
Psyr_1305 and Psyr_1306 overlap by 1 nucleotides
Psyr_1302: Psyr_1302 - Leucine-rich repeat protein, at 1,472,181 to 1,478,153
_1302
Psyr_1303: Psyr_1303 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 1,478,451 to 1,480,073
_1303
Psyr_1304: Psyr_1304 - CheW-like protein, at 1,480,081 to 1,480,617
_1304
Psyr_1305: Psyr_1305 - MCP methyltransferase, CheR-type, at 1,480,614 to 1,481,894
_1305
Psyr_1306: Psyr_1306 - CheW-like protein, at 1,481,894 to 1,482,583
_1306
Group
Condition
Psyr
_1302
Psyr
_1303
Psyr
_1304
Psyr
_1305
Psyr
_1306
in planta
apoplastic; Pepper
+0.1
-0.1
-1.9
-0.1
-0.2
in planta
apoplastic; Lima bean
+0.1
-0.3
-1.7
+0.2
-0.4
aphid
library passed through aphids in food, 72 hours
+0.0
-0.4
-0.4
-0.5
-0.6
aphid
library passed through aphids in food, 72 hours
-0.0
+0.2
-0.5
-0.4
-1.0
aphid
library passed through aphids in food, 72 hours
+0.2
+0.3
-0.9
-0.5
-0.2
stress
KB with Erythromycin 25 ug/ml
+0.1
-0.0
-1.3
+0.1
-0.1
carbon source
D-Mannose (C)
+0.2
+0.0
-1.4
-0.4
+0.7
stress
KB with Sclareolide 10 mM
+0.1
+0.1
-1.2
+0.1
+0.1
stress
KB with Avocatin A 10 mM
+0.0
-0.1
-1.0
+0.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.2
-0.1
-0.7
+0.3
+0.6
stress
KB with Leucodin 10 mM
+0.2
+0.2
+0.4
-0.5
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.1
-0.3
-0.7
+0.5
+0.5
in planta
epiphytic; Green bean
+0.0
-0.3
-1.0
+0.2
+1.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.5
-0.3
+0.5
-0.1
-0.3
in planta
epiphytic; Green bean
+0.1
+0.6
-0.7
+0.6
+0.4
in planta
apoplastic, grinding recovery; Green bean
+0.0
-0.6
+0.8
+0.2
+0.6
in planta
epiphytic; Lima bean
+0.1
+0.4
+0.9
-0.2
+0.1
stress
KB with Naringin 250 ug/ml
+0.1
+0.1
+1.3
+0.1
-0.2
stress
KB with Rotenone 0.25 mg/ml
+0.2
+0.3
+0.2
+0.4
+0.4
stress
KB with Fusaric 250 ug/ml
+0.0
+0.0
+1.3
+0.2
-0.0
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.3
-0.0
+0.7
+0.2
+0.5
in planta
apoplastic; Lima bean
-0.1
+0.3
+0.3
+0.4
+0.6
stress
KB with Rifampicin 0.1 mg/ml
+0.3
-0.0
+0.7
+0.3
+0.6
stress
KB with Rotenone 0.125 mg/ml
+0.3
+0.1
+0.9
+0.2
+0.5
in planta
apoplastic; Lima bean
-0.0
+0.3
+0.8
+0.5
+0.5
in planta
apoplastic; Green bean; 13 days
-0.1
+0.4
+1.8
-0.1
+0.3
stress
KB with Nitrofurantoin 0.25 mg/ml
+0.2
+0.3
+1.0
+0.3
+0.5
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+0.2
+5.1
-0.3
-0.3
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
-0.3
+6.0
-0.4
-0.4
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
+0.2
+5.7
-0.1
-0.7
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