Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_1298 and Psyr_1299 are separated by 112 nucleotidesPsyr_1299 and Psyr_1300 are separated by 63 nucleotidesPsyr_1300 and Psyr_1301 are separated by 298 nucleotidesPsyr_1301 and Psyr_1302 are separated by 57 nucleotides Psyr_1298: Psyr_1298 - exonuclease RecJ, at 1,465,993 to 1,467,708 _1298 Psyr_1299: Psyr_1299 - NADH:flavin oxidoreductase/NADH oxidase, at 1,467,821 to 1,468,927 _1299 Psyr_1300: Psyr_1300 - PAS/PAC sensor hybrid histidine kinase, at 1,468,991 to 1,471,078 _1300 Psyr_1301: Psyr_1301 - Protein of unknown function DUF533, at 1,471,377 to 1,472,123 _1301 Psyr_1302: Psyr_1302 - Leucine-rich repeat protein, at 1,472,181 to 1,478,153 _1302
Group Condition Psyr_1298 Psyr_1299 Psyr_1300 Psyr_1301 Psyr_1302
in planta epiphytic; Lima bean -0.4 -0.3 -0.0 -0.2 +0.2
in planta apoplastic; Green bean; 13 days -0.5 +0.5 -0.4 -0.1 -0.1
in planta apoplastic; Lima bean -0.6 +0.1 -0.1 +0.2 +0.1
in planta apoplastic; Pepper +0.6 -0.3 -0.2 -0.1 -0.1
aphid library passed through aphids in food, 72 hours -0.2 +0.3 -0.5 +0.3 +0.0
stress KB with Nitrofurantoin 0.25 mg/ml -0.6 +0.1 +0.1 +0.1 +0.2
in planta epiphytic; Green bean -0.3 +0.5 +0.2 -0.3 +0.0
stress KB with Mitomycin C 0.625 ug/ml -1.0 +0.3 +0.5 +0.4 +0.1
stress KB with Methanol 5 vol% -0.5 +0.4 +0.4 -0.0 +0.0
in planta apoplastic; Pepper +0.2 -0.6 +0.2 +0.4 +0.2
in planta apoplastic, sonication recovery; Green bean -0.0 +0.5 +0.5 -0.6 +0.1
in planta apoplastic, grinding recovery; Green bean -0.3 +0.7 +0.4 -0.4 +0.0
in planta apoplastic, sonication recovery; Green bean -0.2 +0.5 +0.5 -0.3 +0.1
carbon source D-Gluconic (C) +0.4 +0.3 -0.2 +0.1 +0.0
stress KB with Carbenicillin 250 ug/ml +0.5 +0.2 +0.0 -0.2 +0.2
carbon source Succinic Acid (C) +0.3 +0.5 -0.1 +0.2 +0.1
stress KB with Paeonol 10 mM +0.5 +0.1 -0.1 +0.3 +0.1
stress KB with Totarol 10 mM +0.4 +0.2 +0.0 +0.4 +0.1
stress KB with Terpene 10 mM +0.4 +0.1 -0.0 +0.4 +0.2
stress KB with Anisodamine Hydrobromide () 10 mM +0.0 +0.2 +0.1 +0.3 +0.5
carbon source Sucrose (C) +0.4 +0.5 -0.2 +0.5 -0.1
stress KB with Flavone 0.25 mg/ml +0.1 +0.2 +0.4 +0.3 +0.2
stress KB with Helenine 10 mM +0.5 +0.2 -0.1 +0.4 +0.1
stress KB with Physcion 10 mM +0.4 +0.3 +0.1 +0.4 +0.1
carbon source Glycerol (C) +0.5 +0.3 +0.0 +0.3 +0.2
stress KB with Chrysophanol 10 mM +0.5 +0.2 -0.0 +0.6 +0.0
carbon source Fumaric (C) +0.7 +0.1 +0.1 +0.3 +0.1
stress KB with Rifampicin 0.1 mg/ml +0.2 +0.5 +0.3 +0.0 +0.3
stress KB with Veratrine 10 mM +0.2 +0.3 +0.2 +0.4 +0.3
kb KB +0.5 +0.2 +0.2 +0.5 +0.1
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