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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1263 and Psyr_1264 are separated by 596 nucleotides
Psyr_1264 and Psyr_1265 are separated by 450 nucleotides
Psyr_1265 and Psyr_1266 are separated by 176 nucleotides
Psyr_1266 and Psyr_1267 overlap by 1 nucleotides
Psyr_1263: Psyr_1263 - ATPase, at 1,421,368 to 1,426,062
_1263
Psyr_1264: Psyr_1264 - hypothetical protein, at 1,426,659 to 1,427,144
_1264
Psyr_1265: Psyr_1265 - hypothetical protein, at 1,427,595 to 1,429,571
_1265
Psyr_1266: Psyr_1266 - Twin-arginine translocation pathway signal, at 1,429,748 to 1,431,121
_1266
Psyr_1267: Psyr_1267 - tRNA-adenosine deaminase, at 1,431,121 to 1,431,630
_1267
Group
Condition
Psyr
_1263
Psyr
_1264
Psyr
_1265
Psyr
_1266
Psyr
_1267
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.2
-0.2
-0.3
-0.5
N.D.
carbon source
4-hydroxybutyric (C)
-0.1
-0.5
-0.1
-0.5
N.D.
stress
KB with Berberine 250 ug/ml
-0.0
-0.7
-0.2
-0.3
N.D.
carbon source
Fumaric (C)
+0.1
-0.2
-0.0
-0.9
N.D.
stress
KB with Nalidixic 12.5 ug/ml
-0.2
-0.3
-0.2
-0.3
N.D.
nophagecontrol
TIme6-nophage
+0.0
-0.6
-0.0
-0.3
N.D.
carbon source
Glycerol (C)
-0.0
+0.1
-0.1
-0.8
N.D.
in planta
apoplastic; Lima bean
+0.1
-0.4
-0.0
-0.5
N.D.
stress
KB with Huperzine A 10 mM
+0.1
-0.5
-0.1
-0.2
N.D.
carbon source
Succinic Acid (C)
+0.1
+0.4
+0.0
-1.1
N.D.
aphid
library passed through aphids in food, 72 hours
-0.1
-0.8
+0.1
+0.3
N.D.
stress
KB with Fusaric 250 ug/ml
-0.1
+0.3
-0.0
-0.6
N.D.
in planta
Green bean; epiphytic
+0.5
-0.6
+0.1
-0.4
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.4
+0.4
-0.1
-0.4
N.D.
stress
KB with Acridine orange 62.5 ug/ml
-0.1
+0.7
-0.2
-0.7
N.D.
in planta
apoplastic; Lima bean
+0.2
+0.1
-0.0
-0.6
N.D.
in planta
apoplastic, grinding recovery; Green bean
+0.0
+0.3
+0.1
-0.6
N.D.
in planta
Green bean; epiphytic
+0.6
-0.5
+0.0
-0.3
N.D.
stress
KB with Aristolochic Acid 10 mM
-0.2
+0.5
+0.1
-0.3
N.D.
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.7
+0.2
-0.6
N.D.
stress
KB with Veratrine 10 mM
-0.0
+0.6
+0.1
-0.2
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.1
-0.2
+0.0
+0.5
N.D.
in planta
epiphytic; Lima bean
+0.0
+0.5
+0.1
-0.3
N.D.
stress
KB with Resveratrol 10 mM
+0.0
+0.6
+0.1
-0.2
N.D.
in planta
epiphytic; Green bean
+0.3
+0.4
+0.0
-0.2
N.D.
stress
KB with Diallyl sulfide 10 mM
+0.0
+0.5
+0.3
-0.1
N.D.
stress
KB with Solanesol 10 mM
+0.0
+0.6
+0.3
+0.0
N.D.
stress
KB with Totarol 10 mM
+0.0
+0.5
+0.1
+0.2
N.D.
stress
KB with Plumbagin 10 mM
+0.0
+0.7
+0.2
-0.0
N.D.
stress
KB with Sclareolide 10 mM
-0.0
+0.7
+0.3
+0.2
N.D.
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