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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1235 and Psyr_1236 are separated by 159 nucleotides
Psyr_1236 and Psyr_1237 are separated by 44 nucleotides
Psyr_1237 and Psyr_1238 are separated by 81 nucleotides
Psyr_1238 and Psyr_1239 are separated by 71 nucleotides
Psyr_1235: Psyr_1235 - serine O-acetyltransferase, at 1,393,300 to 1,394,076
_1235
Psyr_1236: Psyr_1236 - transcriptional regulator, BadM/Rrf2 family, at 1,394,236 to 1,394,727
_1236
Psyr_1237: Psyr_1237 - cysteine desulfurase IscS, at 1,394,772 to 1,395,986
_1237
Psyr_1238: Psyr_1238 - FeS cluster assembly scaffold IscU, at 1,396,068 to 1,396,454
_1238
Psyr_1239: Psyr_1239 - HesB/YadR/YfhF:Iron-sulfur cluster assembly protein IscA, at 1,396,526 to 1,396,849
_1239
Group
Condition
Psyr
_1235
Psyr
_1236
Psyr
_1237
Psyr
_1238
Psyr
_1239
aphid
library passed through aphids in food, 72 hours
-0.0
-1.5
N.D.
N.D.
N.D.
stress
KB with Terpene 10 mM
-0.4
-1.0
N.D.
N.D.
N.D.
stress
KB with Emodin 10 mM
-0.5
-1.0
N.D.
N.D.
N.D.
stress
KB with Methanol 5 vol%
-0.9
-0.6
N.D.
N.D.
N.D.
stress
KB with capsaicin 0.125 mg/ml
-0.4
-1.0
N.D.
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-0.7
-0.7
N.D.
N.D.
N.D.
stress
KB with Levodopa 10 mM
-0.1
-1.3
N.D.
N.D.
N.D.
carbon source
4-hydroxybutyric (C)
-0.5
-0.9
N.D.
N.D.
N.D.
stress
KB with Gossypetin 10 mM
-0.3
-1.0
N.D.
N.D.
N.D.
stress
KB with Harmol 10 mM
+0.2
-1.5
N.D.
N.D.
N.D.
stress
KB with Resveratrol 10 mM
-0.2
-1.1
N.D.
N.D.
N.D.
kb
KB
-0.4
-0.9
N.D.
N.D.
N.D.
stress
KB with Palmatine chloride 10 mM
-0.4
-0.8
N.D.
N.D.
N.D.
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.7
-0.6
N.D.
N.D.
N.D.
stress
KB with Prenyletin 10 mM
-0.3
-0.9
N.D.
N.D.
N.D.
stress
KB with Nonanoic 10 mM
-0.1
-1.1
N.D.
N.D.
N.D.
stress
KB with Helenine 10 mM
-0.3
-0.9
N.D.
N.D.
N.D.
stress
KB with Rifampicin 0.1 mg/ml
-0.3
-0.8
N.D.
N.D.
N.D.
stress
KB with Ginkgolide A 10 mM
-0.3
-0.9
N.D.
N.D.
N.D.
stress
KB with Lupeol 10 mM
+0.3
-1.4
N.D.
N.D.
N.D.
stress
KB with Plumbagin 10 mM
+0.1
-1.1
N.D.
N.D.
N.D.
in planta
epiphytic; Green bean
+0.3
-1.2
N.D.
N.D.
N.D.
stress
KB with Avocadyne 10 mM
+0.2
-1.0
N.D.
N.D.
N.D.
stress
KB with 2,5-Dihydroxybenzoic Acid 10 mM
+0.3
-0.9
N.D.
N.D.
N.D.
in planta
epiphytic; Green bean
+0.6
-1.2
N.D.
N.D.
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.8
-1.3
N.D.
N.D.
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.7
-1.0
N.D.
N.D.
N.D.
in planta
apoplastic; Lima bean
-0.7
+0.7
N.D.
N.D.
N.D.
stress
KB with Acridine orange 62.5 ug/ml
+0.7
-0.6
N.D.
N.D.
N.D.
in planta
apoplastic; Pepper
+0.6
+0.7
N.D.
N.D.
N.D.
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