Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_1223 and Psyr_1224 are separated by 208 nucleotidesPsyr_1224 and Psyr_1225 overlap by 4 nucleotidesPsyr_1225 and Psyr_1226 are separated by 414 nucleotidesPsyr_1226 and Psyr_RNA20 are separated by 202 nucleotides Psyr_1223: Psyr_1223 - CDS, at 1,381,929 to 1,382,288 _1223 Psyr_1224: Psyr_1224 - type III effector HopZ3, at 1,382,497 to 1,383,732 _1224 Psyr_1225: Psyr_1225 - hypothetical protein, at 1,383,729 to 1,384,181 _1225 Psyr_1226: Psyr_1226 - hypothetical protein, at 1,384,596 to 1,384,949 _1226 Psyr_RNA20: Psyr_RNA20 - tRNA-Leu, at 1,385,152 to 1,385,236 _RNA20
Group Condition Psyr_1223 Psyr_1224 Psyr_1225 Psyr_1226 Psyr_RNA20
stress KB with Mitomycin C 0.625 ug/ml N.D. -0.5 -1.3 -0.2 N.D.
stress KB with Fusaric 250 ug/ml N.D. -0.4 -0.4 -0.9 N.D.
stress KB with Fusaric 250 ug/ml N.D. -0.4 -0.3 -0.7 N.D.
stress KB with Anisodamine Hydrobromide () 10 mM N.D. -0.5 -0.2 -0.8 N.D.
stress KB with Aristolochic Acid 10 mM N.D. -0.3 -0.2 -0.8 N.D.
stress KB with Methanol 5 vol% N.D. -0.4 -0.7 +0.1 N.D.
stress KB with Mexicanolide 10 mM N.D. -0.2 -0.3 -0.5 N.D.
stress KB with Benzalkonium Chloride 6.25 ug/ml N.D. -0.1 -0.9 +0.1 N.D.
stress KB with Terpene 10 mM N.D. -0.2 -0.8 +0.4 N.D.
stress KB with Gossypol-Acetic Acid Complex 10 mM N.D. -0.3 -0.5 +0.3 N.D.
stress KB with Matrine 10 mM N.D. -0.2 -0.7 +0.5 N.D.
stress KB with Oxonitine 10 mM N.D. -0.2 -0.5 +0.4 N.D.
stress KB with Bergenin 10 mM N.D. -0.3 -0.5 +0.5 N.D.
stress KB with Acridine orange 62.5 ug/ml N.D. -0.1 -0.8 +0.7 N.D.
stress KB with Estragole 10 mM N.D. -0.2 -0.6 +0.5 N.D.
stress KB with Palmatine chloride 10 mM N.D. -0.1 -0.6 +0.5 N.D.
stress KB with Theaflavin 10 mM N.D. -0.3 -0.5 +0.6 N.D.
stress KB with Dimethyl Sulfoxide 1 vol% N.D. -0.3 -0.5 +0.6 N.D.
stress KB with Esculin Monohydrate 10 mM N.D. -0.3 -0.4 +0.5 N.D.
carbon source D-Gluconic (C) N.D. -0.1 +0.7 -0.8 N.D.
stress KB with Chloramphenicol 12.5 ug/ml N.D. -0.2 -0.5 +0.6 N.D.
stress KB with Quinine Hdrochloride 10 mM N.D. -0.2 -0.3 +0.5 N.D.
kb KB N.D. -0.0 -0.5 +0.7 N.D.
carbon source 4-hydroxybutyric (C) N.D. +0.0 +0.8 -0.5 N.D.
in planta apoplastic; Pepper N.D. +0.1 -0.4 +0.7 N.D.
in planta apoplastic, grinding recovery; Green bean N.D. +0.2 -0.4 +0.7 N.D.
stress KB with Berberine 250 ug/ml N.D. -0.1 -0.1 +0.9 N.D.
in planta epiphytic; Green bean N.D. +0.1 +1.0 -0.3 N.D.
in planta apoplastic, grinding recovery; Green bean N.D. +0.1 -0.0 +1.1 N.D.
in planta apoplastic, sonication recovery; Green bean N.D. -0.0 +0.5 +1.1 N.D.
remove
Psyr_1223
plot		 remove
Psyr_1224
plot		 remove
Psyr_1225		 remove
Psyr_1226
plot		 remove
Psyr_RNA20
plot