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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1137 and Psyr_1138 are separated by 116 nucleotides
Psyr_1138 and Psyr_1139 are separated by 65 nucleotides
Psyr_1139 and Psyr_1140 are separated by 606 nucleotides
Psyr_1140 and Psyr_1141 are separated by 463 nucleotides
Psyr_1137: Psyr_1137 - Protein of unknown function UPF0153, at 1,288,482 to 1,289,237
_1137
Psyr_1138: Psyr_1138 - GCN5-related N-acetyltransferase, at 1,289,354 to 1,289,815
_1138
Psyr_1139: Psyr_1139 - Response regulator receiver:CheW-like protein, at 1,289,881 to 1,290,777
_1139
Psyr_1140: Psyr_1140 - Disulfide bond formation protein DsbB, at 1,291,384 to 1,291,893
_1140
Psyr_1141: Psyr_1141 - cytochrome bo3 quinol oxidase subunit 2, at 1,292,357 to 1,293,298
_1141
Group
Condition
Psyr
_1137
Psyr
_1138
Psyr
_1139
Psyr
_1140
Psyr
_1141
carbon source
L-Malic (C)
-0.3
-0.8
-0.1
-2.6
N.D.
in planta
apoplastic; Green bean; 6 days
-0.1
-0.6
-0.3
-2.1
N.D.
in planta
apoplastic; Lima bean
+0.1
-1.1
+0.3
-2.2
N.D.
in planta
epiphytic; Lima bean
+0.2
-0.8
-0.4
-1.8
N.D.
in planta
epiphytic; Lima bean
-0.1
-0.4
-0.1
-2.0
N.D.
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
+0.2
-0.3
-0.1
-2.4
N.D.
nophagecontrol
TIme6-nophage
-0.2
-0.7
+0.0
-1.5
N.D.
in planta
apoplastic; Lima bean
+0.2
-0.5
+0.2
-2.3
N.D.
carbon source
a-Ketoglutaric (C)
+0.0
-0.7
-0.1
-1.4
N.D.
stress
KB with Ampicillin 15.6 ug/ml
+0.1
-1.3
-0.3
-0.8
N.D.
in planta
Green bean; epiphytic
+0.0
-0.2
+0.1
-2.1
N.D.
in planta
epiphytic; Lima bean
-0.1
-0.4
+0.1
-1.7
N.D.
in planta
apoplastic; Pepper
+0.3
-1.3
-0.3
-0.8
N.D.
carbon source
Citric Acid (C)
+0.1
-0.2
-0.4
-1.6
N.D.
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.7
+0.1
-1.3
N.D.
stress
KB with Totarol 10 mM
-0.3
-0.6
+0.2
-1.2
N.D.
stress
KB with Palmatine chloride 10 mM
-0.2
-0.4
+0.2
-1.3
N.D.
stress
KB with Emodin 10 mM
-0.3
-1.0
+0.3
-0.8
N.D.
carbon source
D-Mannose (C)
-0.0
+0.7
+0.1
-2.3
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.9
-0.4
-1.8
N.D.
in planta
epiphytic; Green bean
-0.3
+0.9
-0.4
-1.1
N.D.
aphid
library passed through aphids in food, 72 hours
-0.5
+0.5
+0.8
-1.7
N.D.
stress
MBOA 2.5 mM
+0.0
+0.7
-0.3
-1.0
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.1
+0.7
-0.2
-1.0
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.0
-1.5
+0.4
+0.7
N.D.
in planta
apoplastic; Lima bean
+0.4
+0.6
+0.4
-1.6
N.D.
aphid
library passed through aphids in food, 72 hours
+0.6
+0.4
+0.7
-1.6
N.D.
carbon source
D-Gluconic (C)
+0.2
+1.2
-0.1
-1.1
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.4
+1.0
+0.4
+0.4
N.D.
carbon source
Citric Acid (C)
+0.2
+1.0
+0.2
+1.1
N.D.
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