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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1114 and Psyr_1115 overlap by 8 nucleotides
Psyr_1115 and Psyr_1116 are separated by 2 nucleotides
Psyr_1116 and Psyr_1117 are separated by 125 nucleotides
Psyr_1117 and Psyr_1118 are separated by 109 nucleotides
Psyr_1114: Psyr_1114 - glucose ABC transporter membrane protein, at 1,262,693 to 1,263,601
_1114
Psyr_1115: Psyr_1115 - glucose ABC transporter membrane protein, at 1,263,594 to 1,264,439
_1115
Psyr_1116: Psyr_1116 - glucose ABC transporter ATP-binding protein, at 1,264,442 to 1,265,611
_1116
Psyr_1117: Psyr_1117 - porin, OprB family, at 1,265,737 to 1,267,098
_1117
Psyr_1118: Psyr_1118 - Aldose 1-epimerase, at 1,267,208 to 1,268,083
_1118
Group
Condition
Psyr
_1114
Psyr
_1115
Psyr
_1116
Psyr
_1117
Psyr
_1118
carbon source
D-Mannose (C)
-2.2
-2.1
-1.9
+0.2
-0.2
aphid
library passed through aphids in food, 72 hours
-0.1
-0.7
-0.1
-0.4
-0.9
in planta
Green bean; epiphytic
-0.4
-0.0
-0.3
-0.4
-1.0
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.1
-0.3
-0.2
-0.1
-0.7
in planta
Green bean; epiphytic
-0.4
-0.1
-0.3
-0.3
-0.2
stress
KB with Isovanillin 10 mM
-0.2
-0.6
-0.2
-0.2
-0.0
aphid
library passed through aphids in food, 72 hours
-0.1
-0.2
-0.3
-0.1
-0.5
stress
KB with Conessine 10 mM
-0.2
-0.1
+0.1
-0.2
-0.6
stress
KB with Cantharidin 10 mM
-0.1
-0.0
-0.1
-0.1
-0.8
no stress control
no stress control
-0.2
-0.2
-0.0
+0.0
-0.6
in planta
apoplastic; Lima bean
+0.1
-0.2
-0.0
+0.2
-1.0
stress
MBOA 1.2 mM
-0.1
+0.1
+0.1
-0.1
-0.7
in planta
epiphytic; Lima bean
-0.3
-0.2
-0.1
-0.2
+0.2
aphid
library passed through aphids in food, 72 hours
-0.2
+0.0
-0.3
-0.4
+0.1
stress
KB with dihydrojasmonic, methyl ester 10 mM
-0.2
-0.1
+0.2
-0.1
-0.5
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.2
-0.5
-0.1
-0.1
+0.5
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
-0.9
+0.0
-0.1
+0.6
in planta
epiphytic; Lima bean
-0.4
+0.3
+0.3
-0.3
-0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
-0.9
+0.1
-0.1
+0.7
carbon source
Citric Acid (C)
-0.2
-0.3
-0.3
+0.3
+0.4
carbon source
a-Ketoglutaric (C)
-0.1
-0.3
-0.2
+0.0
+0.6
stress
KB with Nalidixic 12.5 ug/ml
-0.1
-0.4
+0.2
-0.0
+0.4
in planta
apoplastic, grinding recovery; Green bean
+0.3
-0.3
+0.2
+0.2
-0.1
in planta
apoplastic; Green bean; 6 days
-0.1
+0.5
-0.2
+0.0
+0.5
in planta
apoplastic; Green bean; 6 days
-0.0
+0.3
-0.2
+0.0
+0.6
in planta
apoplastic, grinding recovery; Green bean
+0.0
-0.3
+0.3
+0.3
+0.5
in planta
apoplastic; Pepper
-0.1
+0.3
+0.2
+0.1
+0.3
stress
KB with Acridine orange 62.5 ug/ml
+0.3
-0.3
+0.1
+0.2
+0.9
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.3
+0.2
+0.3
+0.2
carbon source
Citric Acid (C)
+3.7
+3.5
+3.5
+4.0
+0.5
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